Protein Alignment Dfd and hoxc4a

DIOPT Version :10

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_571197.1
• Gene: hoxc4a / 30345
• ZFINID: ZDB-GENE-990415-112
• Length: 268
• Species: Danio rerio
• Alignment Length: 467
• Identity: 128/467 - (27%)
• Similarity: 161/467 - (34%)
• Gaps: 217/467 - (46%)

  Fly     1 MSSFLMGYPHAPHHVQSPMSMGNGLDPKFPPLADDYHHYNGHYSMTASTGHMSGAVGGGAGVGSV 65
            |||:||.              .|.:||||||..:        ||.
Zfish     3 MSSYLMD--------------SNYIDPKFPPCEE--------YSQ-------------------- 25

  Fly    66 GGGGAGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSN 130
                                 :.|:. .|:|..:|.:......|||.
Zfish    26 ---------------------NSYIP-EHSPEYYSRARDSGYQHHHQ------------------ 50

  Fly   131 YANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSG 195
                      ..:|....:|...|.....||                     |:|..|.|...:|
Zfish    51 ----------ELYPPRASYQERQYNCASIPE---------------------PDTQRGHGLPHAG 84

  Fly   196 AVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQ 260
            .:||.|                                           |.:|.|||.
Zfish    85 HLLGKG-------------------------------------------QSASCEPPP------- 99

  Fly   261 ELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGD 325
               |.|......|..:.           |:....|:.:.|...:
Zfish   100 ---LPLSPATPSAASSA-----------CNQATPEHPNSSASAK--------------------- 129

  Fly   326 SDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRY 390
                          :.::|||||||||:.| |.||. |.||||.||||||.|:||||||||||||
Zfish   130 --------------QPVVYPWMKKIHVSTV-NSSYN-GAEPKRSRTAYTRQQVLELEKEFHYNRY 178

  Fly   391 LTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVR--KKTVDANGNPTPVAKKPTK 453
            |||||||||||:||||||||||||||||||||||::||||| ||  ..|..::|:.|..|.....
Zfish   179 LTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKDHRLPNTK-VRSSSSTGISSGSNTSSAAGVVA 242

  Fly   454 RAASKKQQQAQQ 465
            .|::.....|.:
Zfish   243 AASTTNTMSASE 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	51/55 (93%)
hoxc4a	NP_571197.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	70..129		21/143 (15%)
		Antp-type hexapeptide	133..138		3/4 (75%)
		Homeodomain	155..211	CDD:459649	51/55 (93%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..268		14/44 (32%)