DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxb8a

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_005171620.1 Gene:hoxb8a / 30343 ZFINID:ZDB-GENE-990415-108 Length:246 Species:Danio rerio


Alignment Length:294 Identity:77/294 - (26%)
Similarity:115/294 - (39%) Gaps:105/294 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 YGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQ---CSST---EP---------PTNTALGLQELG 263
            ||.|.|.............|...|.:...|.|   |:.|   ||         ...|..|.|:..
Zfish    40 YGPGTGATFQHAPQIQEFYHHGASTLSAAPYQQSPCAVTCHGEPGNFYGYDALQRQTLFGAQDAD 104

  Fly   264 LKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDS 328
            |               :|....:|....:|.|.|:..:..      ||.:|              
Zfish   105 L---------------VQYSDCKLATGGIGDETDNTEQSP------SPTQL-------------- 134

  Fly   329 DEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTR 393
                           :|||:....||           .:|.|..|:|:|.|||||||.:|.||||
Zfish   135 ---------------FPWMRPQVAAG-----------RRRGRQTYSRYQTLELEKEFLFNPYLTR 173

  Fly   394 RRRIEIAHTLVLSERQIKIWFQNRRMKWKKDN---KLPNTKNVRKKTVDANGNPTPVAKKPTKRA 455
            :||||::|.|.|:|||:|||||||||||||:|   |.|::|:                       
Zfish   174 KRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKS----------------------- 215

  Fly   456 ASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSL 489
               :|:|.:::::.::|.:.......:|.::..:
Zfish   216 ---EQEQIEKEKREKEQASGTQSAGEDCDKAKQM 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 36/51 (71%)
hoxb8aXP_005171620.1 Homeobox 150..202 CDD:278475 36/51 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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