DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxb3a

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571192.2 Gene:hoxb3a / 30339 ZFINID:ZDB-GENE-990415-104 Length:417 Species:Danio rerio


Alignment Length:525 Identity:126/525 - (24%)
Similarity:174/525 - (33%) Gaps:197/525 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 PHHHSNSAISGHHQASAGGYSSNYANATP-PSHPHS--------HPHAHPHQSLGYYVHHAPEFI 163
            |...:::.:.|.:|.||....|...:|.| |.|..:        .|...|.       ||.|..:
Zfish    31 PAFQNSAHLEGDYQRSACSLQSLGTSAPPQPQHAKTKELNGSCMRPSLPPE-------HHPPPQV 88

  Fly   164 SAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGST 228
                  |.|.|....||.  |.:...||.|.|.|.|.|                 ||:..|    
Zfish    89 ------SPPQNTVNVAAT--NATQQPGGSGGGGVAGSG-----------------GTSKSS---- 124

  Fly   229 HSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMG 293
                 |..|.|        :|.|             .|.|:|                       
Zfish   125 -----SKSSSM--------ATNP-------------TLTKQI----------------------- 140

  Fly   294 SENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANG 358
                            .|....|..|......|.|.....||::.||:                 
Zfish   141 ----------------FPWMKESRQNTKQKNSSPSASSANAESSGGEK----------------- 172

  Fly   359 SYQPG-MEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 422
             ..|| ...||.|||||..|::|||||||:||||.|.||:|:|:.|.||||||||||||||||:|
Zfish   173 -SPPGSAASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYK 236

  Fly   423 KDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAAS----------------------KKQQQAQQ 465
            ||.|       .|....::|.|:|....|....:|                      |..|.|..
Zfish   237 KDQK-------SKGIGSSSGGPSPTGSPPLPMQSSAGFMNSMHSMGSYDAPSPPSFNKPHQNAYA 294

  Fly   466 QQQSQQQQTQQTPVMNECIRSDSLESIGDV------------SSSLGNP-----------PYIPA 507
            ...:.|...:..|..         :..|:.            |.:.|.|           .|:.|
Zfish   295 MSTAYQNPMKGCPPQ---------QKYGNTPPDYDPHGLQGNSGNYGTPNMQGSPVYVGGNYVDA 350

  Fly   508 APETTSSYPGSQQHLSNNNNNGSGNNNNNNNNNNSNLNNNNNNNQMGHTNLHGHLQQ----QQSD 568
            .|.|..|..| ..||.::.:  :..:.|.....::|.::...:....:|:|..|...    |::.
Zfish   351 MPATGPSMYG-LNHLPHHQS--ASMDYNGATQMSANQHHGPCDPHPTYTDLSAHHPSQGRIQEAP 412

  Fly   569 LMTNL 573
            .:|:|
Zfish   413 KLTHL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 41/55 (75%)
hoxb3aNP_571192.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..135 31/145 (21%)
Antp-type hexapeptide 140..145 2/43 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..184 12/54 (22%)
Homeodomain 181..237 CDD:459649 41/55 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..290 10/59 (17%)
DUF4074 353..415 CDD:463833 11/64 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..417 6/35 (17%)

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