DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxb1a

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571190.2 Gene:hoxb1a / 30337 ZFINID:ZDB-GENE-990415-101 Length:316 Species:Danio rerio


Alignment Length:432 Identity:103/432 - (23%)
Similarity:146/432 - (33%) Gaps:156/432 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NGLDPKFPPLADDYHHYNGHYSMTASTGHMSGAVGGGAGVGSVGGGGAGGMTGHPHSMHPADMVS 87
            |...||     ..|||.:..:.....|||.|.:.... |...|||           |..|....:
Zfish    20 NAYSPK-----AGYHHLDQAFPGPFHTGHASDSYNAD-GRLYVGG-----------SNQPPTAAA 67

  Fly    88 DYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNY-----ANATPPSHPHSHPHAH 147
                        .|.|.:.:..||.:...:|......|..:::|     ||:....|.:   ..:
Zfish    68 ------------QHQHQNGIYAHHQHQNQTGMGLTYGGTGTTSYGTQACANSDYAQHQY---FIN 117

  Fly   148 PHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANGYYG 212
            |.|. |.|.|               ::|:       :|||                   |:.:||
Zfish   118 PEQD-GMYYH---------------SSGF-------STSN-------------------ASPHYG 140

  Fly   213 GYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAG 277
            ...|.|..|.|:|.:...|.|.           |.                             |
Zfish   141 SMAGAYCGAQGAVPAAPYQHHG-----------CE-----------------------------G 165

  Fly   278 QQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERI 342
            |..|      |....|:..|..:.:..                    :.|:|:....:|.|    
Zfish   166 QDHQ------RAYSQGTYADLSASQGT--------------------EKDTDQPPPGKTFD---- 200

  Fly   343 IYPWMKKIHVAGVANGSYQPGMEPKRQ-RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLS 406
               |||............:.|:.|:.. ||.:|..|:.|||||||:::||||.||:|||.||.|:
Zfish   201 ---WMKVKRNPPKTGKVAEYGLGPQNTIRTNFTTKQLTELEKEFHFSKYLTRARRVEIAATLELN 262

  Fly   407 ERQIKIWFQNRRMKWKKDNK---LPNTKNVRKKTVDANGNPT 445
            |.|:||||||||||.||..|   .|.:....|...|.:.:.|
Zfish   263 ETQVKIWFQNRRMKQKKREKEGLAPASSTSSKDLEDQSDHST 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 35/51 (69%)
hoxb1aNP_571190.2 Homeobox 226..278 CDD:278475 35/51 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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