Protein Alignment Dfd and hoxd4a

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001119917.1
• Gene: hoxd4a / 30329
• ZFINID: ZDB-GENE-980526-214
• Length: 256
• Species: Danio rerio
• Alignment Length: 347
• Identity: 111/347 - (31%)
• Similarity: 135/347 - (38%)
• Gaps: 124/347 - (35%)

  Fly   128 SSNYANAT-PPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGG 191
            :|.|.:.. ||...:|.....|.||.|||   :|         |..|:...|  .:.:.||
Zfish    29 NSKYVDPKFPPCEEYSQNSYIPEQSPGYY---SP---------SQDTDFQHP--GIYSRSN---- 75

  Fly   192 GGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTA 256
                               |........|..||  |...:||.........|....:.:.|....
Zfish    76 -------------------YSEQPYSCSTVQGS--SVQPRGHVQDQASTPSPFPAQTEQCPAVQI 119

  Fly   257 LGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDD 321
            .|.:..|.:...:.:..:|..|
Zfish   120 SGSRTGGQQQNTKTQNGIPTKQ------------------------------------------- 141

  Fly   322 DLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFH 386
                              ..::||||||:||..| |..| .|.||||.||||||.|:||||||||
Zfish   142 ------------------PAVVYPWMKKVHVTTV-NPDY-TGPEPKRSRTAYTRQQVLELEKEFH 186

  Fly   387 YNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKP 451
            :||||||||||||||||.||||||||||||||||||||:||||||.
Zfish   187 FNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKG------------------- 232

  Fly   452 TKRAASKKQQQAQQQQQSQQQQ 473
              |:||...|.||..|:..|.:
Zfish   233 --RSASVGNQHAQHAQKDSQTE 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	47/51 (92%)
hoxd4a	NP_001119917.1	Homeobox	169..222	CDD:278475	47/52 (90%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	1	1.000	-	-		otm26182
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45771
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	7	6.910