Protein Alignment Dfd and Cdx4

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001100412.1
• Gene: Cdx4 / 302400
• RGDID: 1561529
• Length: 288
• Species: Rattus norvegicus
• Alignment Length: 395
• Identity: 96/395 - (24%)
• Similarity: 131/395 - (33%)
• Gaps: 162/395 - (41%)

  Fly    57 GGG--AGVGSVGGGGAGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGH 119
            |||  ||||:.||.|         |..||   |::.|....||...:.|..::          ..
  Rat    22 GGGSTAGVGTSGGSG---------SPLPA---SNFTAAPVYPHYMGYPHMSNM----------DP 64

  Fly   120 HQASAGGYSSNYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPN 184
            |..|.|.:||.|   :||....|   .:|..|           .:.|.|..:......||...|:
  Rat    65 HGPSLGAWSSPY---SPPREDWS---TYPGPS-----------STMGTVPMNDMTSSSPAFGSPD 112

  Fly   185 TSNGGGGGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSST 249
            .|..|..||:|....||::..:|:........  ||:.|:...:.|: |||
  Rat   113 YSTLGPTGGAGGASNGGSLPDAASESLVSIDS--GTSGGATSPSRSR-HSP-------------- 160

  Fly   250 EPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDEL 314
                                                                             
  Rat   161 ----------------------------------------------------------------- 160

  Fly   315 GSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKK-IHVAGVANGSYQPGMEPKRQRTAYTRHQI 378
                                         |.||:| :.|.|...       ..::.|..||.||.
  Rat   161 -----------------------------YAWMRKTVQVTGKTR-------TKEKYRVVYTDHQR 189

  Fly   379 LELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK--DNKLPNTKNVRKKTVDAN 441
            ||||||||.|||:|.||:.|:|..|.|||||:||||||||.|.:|  ..|:...:|........:
  Rat   190 LELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKKKISQFENSGGSVQSDS 254

  Fly   442 GNPTP 446
            |:.:|
  Rat   255 GSISP 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	36/51 (71%)
Cdx4	NP_001100412.1	Caudal_act	13..166	CDD:398418	52/293 (18%)
		Homeobox	181..234	CDD:395001	36/52 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910