DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and tlx3b

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_739572.2 Gene:tlx3b / 266965 ZFINID:ZDB-GENE-021021-1 Length:300 Species:Danio rerio


Alignment Length:397 Identity:90/397 - (22%)
Similarity:131/397 - (32%) Gaps:139/397 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 PPSHPH-----SHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSG 195
            |.|.|.     |.|..|...|.|.      :.|.:|   :|..:......|...:|:|......|
Zfish     5 PSSSPSGTSQTSQPTQHEPISFGI------DQILSG---TDQESQQNSTRNSSESSSGSSSASGG 60

  Fly   196 AVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDL------------PLQCSS 248
            ....|...|.||..|....|..:|.|      ...:..||:...:.|            || .::
Zfish    61 CYHLGSPTGASATPYTTLTGTFHGIA------APYEESSPYGMNLTLAPGGVIRVPAHRPL-AAA 118

  Fly   249 TEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGS------ENDDMSEEDRLML 307
            ..||                 :..|||.               :||      |:.....:||...
Zfish   119 VPPP-----------------MASAVPG---------------LGSLSFPWMESSQRFAKDRFAA 151

  Fly   308 DRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQ--R 370
            ..:|                        .|...||.:|              ||....|||:  |
Zfish   152 ALTP------------------------FTVARRIGHP--------------YQNRTPPKRKKPR 178

  Fly   371 TAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRK 435
            |:::|.||.||||.||..:||....|..:|.||.:::.|:|.||||||.||            |:
Zfish   179 TSFSRVQICELEKRFHRQKYLASAERAALAKTLKMTDAQVKTWFQNRRTKW------------RR 231

  Fly   436 KTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLESI-------G 493
            :|.:         ::..:|..:.:.....|....|:..|...|....||.:.||.::       .
Zfish   232 QTAE---------EREAERQQANRLMIQLQHDAFQKSLTDSVPTDPLCIHNSSLFALQNLQPWAS 287

  Fly   494 DVSSSLG 500
            :.||.||
Zfish   288 EESSKLG 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 29/57 (51%)
tlx3bNP_739572.2 Homeodomain 175..231 CDD:459649 27/67 (40%)

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