DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and GBX2

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001476.2 Gene:GBX2 / 2637 HGNCID:4186 Length:348 Species:Homo sapiens


Alignment Length:353 Identity:96/353 - (27%)
Similarity:135/353 - (38%) Gaps:94/353 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 ATPPSHPHSHPHAHPHQSLGYYVHHA-------------PEFISAGAVHSDPTNGYGPAAN--VP 183
            |.||:|||   |..|....|:....|             |...||...|.:     ..||.  .|
Human    73 ALPPAHPH---HQIPSLPTGFCSSLAQGMALTSTLMATLPGGFSASPQHQE-----AAAARKFAP 129

  Fly   184 NTSNGGGGGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSS 248
            ....|||.......|...|..|.          |:....||:                  |..|:
Human   130 QPLPGGGNFDKAEALQADAEDGK----------GFLAKEGSL------------------LAFSA 166

  Fly   249 TEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSEND-DMSEEDRLMLDRSPD 312
            .|....:.:|......|.|.::|:. |.|::          :....|:| |.|.:|.|....:..
Human   167 AETVQASLVGAVRGQGKDESKVEDD-PKGKE----------ESFSLESDVDYSSDDNLTGQAAHK 220

  Fly   313 ELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQ 377
            |       :|.|.:      :.||...             :|.|..:...| :.:|:|||:|..|
Human   221 E-------EDPGHA------LEETPPS-------------SGAAGSTTSTG-KNRRRRTAFTSEQ 258

  Fly   378 ILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANG 442
            :||||||||..:||:...|.:|||.|.|||.|:||||||||.|||:    ....|...||.:.:.
Human   259 LLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR----VKAGNANSKTGEPSR 319

  Fly   443 NPTPVAKKPTKRAASKKQQQAQQQQQSQ 470
            ||..|...|...:....:.|.||.:|::
Human   320 NPKIVVPIPVHVSRFAIRSQHQQLEQAR 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 33/51 (65%)
GBX2NP_001476.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81 6/10 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 9/32 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 20/109 (18%)
Homeobox 250..303 CDD:306543 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.