DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and GBX1

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001092304.1 Gene:GBX1 / 2636 HGNCID:4185 Length:363 Species:Homo sapiens


Alignment Length:438 Identity:105/438 - (23%)
Similarity:153/438 - (34%) Gaps:111/438 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GGGAGVGSVGGGGAGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQ 121
            |||:..|..||||.||    |.:....|                                     
Human     5 GGGSAPGGNGGGGGGG----PGTAFSID------------------------------------- 28

  Fly   122 ASAGGYSSNYANATPPSHPH----SHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANV 182
                    :.....||...|    .:|...|::.|......||..:.||.....|...:  |..:
Human    29 --------SLIGPPPPRSGHLLYTGYPMFMPYRPLVLPQALAPAPLPAGLPPLAPLASF--AGRL 83

  Fly   183 PNTSNGGGGGGSGAVLG-GGAVGGSA---NGYYG------GYGGGYGTA---NGSVGSTHSQGHS 234
            .||...|.|....:::. ..|:...|   :.:||      .......||   |...|....:|..
Human    84 TNTFCAGLGQAVPSMVALTTALPSFAEPPDAFYGPQELAAAAAAAAATAARNNPEPGGRRPEGGL 148

  Fly   235 PHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDM 299
            ...::  ||.:....|||...           .....|..|:               :.:|....
Human   149 EADEL--LPAREKVAEPPPPP-----------PPHFSETFPS---------------LPAEGKVY 185

  Fly   300 SEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKI---------HVAGV 355
            |.::..:...:.|..||...::..|....|:..:..:..|...:.....|:         ..|.|
Human   186 SSDEEKLEASAGDPAGSEQEEEGSGGDSEDDGFLDSSAGGPGALLGPKPKLKGSLGTGAEEGAPV 250

  Fly   356 ANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMK 420
            ..|...||.:.:|:|||:|..|:||||||||..:||:...|.:|||.|.|||.|:||||||||.|
Human   251 TAGVTAPGGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAK 315

  Fly   421 WKKDNKLPNTKNVRKKTVDANGNPTPVAKKP--TKRAASKKQQQAQQQ 466
            ||:    ....||..::.:...||..|...|  ..|.|.:.|.|..:|
Human   316 WKR----IKAGNVSSRSGEPVRNPKIVVPIPVHVNRFAVRSQHQQMEQ 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 33/51 (65%)
GBX1NP_001092304.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 12/74 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..265 27/164 (16%)
Homeobox 264..317 CDD:306543 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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