Protein Alignment Dfd and Hoxc4

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_001103354.1
• Gene: Hoxc4 / 24459
• RGDID: 1586210
• Length: 264
• Species: Rattus norvegicus
• Alignment Length: 278
• Identity: 107/278 - (38%)
• Similarity: 130/278 - (46%)
• Gaps: 66/278 - (23%)

  Fly   206 SANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLP-----------LQCSSTEPPTNTALGL 259
            |.|.|...:...|      .|.|...|...|.|.:..|           ..|:|.:.|.|:
  Rat    24 SQNSYIPEHSPEY------YGRTRESGFQHHHQELYPPPPPRPSYPERQYSCTSLQGPGNS---- 78

  Fly   260 QELGLKLEKRIEEAVPAGQQLQELGMRLRCD--DMGSENDDMSEEDRLMLDRSPDELGSNDNDDD 322
                     |......||....|....| |:  .:...:...|.........:||...|
  Rat    79 ---------RAHGPAQAGHHHPEKSQPL-CEPAPLSGASASPSPAPPACSQPAPDHPSS------ 127

  Fly   323 LGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHY 387
                         ....:.|:|||||||||:.| |.:|..| ||||.||||||.|:|||||||||
  Rat   128 -------------AASKQPIVYPWMKKIHVSTV-NPNYNGG-EPKRSRTAYTRQQVLELEKEFHY 177

  Fly   388 NRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRK--------KTVDANGNP 444
            ||||||||||||||:|.||||||||||||||||||||::||||| ||.        .|:.|   .
  Rat   178 NRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTK-VRSAPPAGAAPSTLSA---A 238

  Fly   445 TPVAKKPTKRAASKKQQQ 462
            ||...:...::|:..:||
  Rat   239 TPGTSEDHSQSATPPEQQ 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	47/51 (92%)
Hoxc4	NP_001103354.1	Homeobox	159..213	CDD:395001	48/53 (91%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810