DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and GSX1

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_663632.1 Gene:GSX1 / 219409 HGNCID:20374 Length:264 Species:Homo sapiens


Alignment Length:86 Identity:47/86 - (54%)
Similarity:58/86 - (67%) Gaps:3/86 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 PWMKKIHVAGVANGSYQ-PGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSER 408
            |..::.|...|.:.|.| |  ..||.|||:|..|:||||:||..|.||:|.||||||..|.|||:
Human   127 PDPRQFHCISVDSSSNQLP--SSKRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYLNLSEK 189

  Fly   409 QIKIWFQNRRMKWKKDNKLPN 429
            |:||||||||:|.||:.|..|
Human   190 QVKIWFQNRRVKHKKEGKGSN 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 35/51 (69%)
GSX1NP_663632.1 SNAG domain. /evidence=ECO:0000250 1..20
Homeobox 151..204 CDD:395001 35/52 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..264 5/10 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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