DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and ceh-30

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_508524.2 Gene:ceh-30 / 191620 WormBaseID:WBGene00000451 Length:237 Species:Caenorhabditis elegans


Alignment Length:214 Identity:59/214 - (27%)
Similarity:93/214 - (43%) Gaps:46/214 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 MLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPG--MEPKR 368
            :|::||:. .|:.||.|    .|.:.:.::.:...|...|       .|...||  ||  .:.::
 Worm    47 ILEQSPNN-SSHSNDHD----PSPQSIKSDFSTSPRASSP-------GGDRMGS--PGSCKKSRK 97

  Fly   369 QRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKD--------- 424
            .||.:|..|:.|||..|...:||:.:.|:::||.:.|::.|:|.|:||||.|||:.         
 Worm    98 ARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQATSGMDLLS 162

  Fly   425 --NKLPNTKN-VRKKTVDAN-------GNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPV 479
              ..|...:| :|.....||       |...|:...|    .|.....|...|.|....:..|.:
 Worm   163 EPGNLSAVQNLIRSSPYWANYITALPMGTQLPMMGLP----MSMIVPPAHAFQPSSSSNSPSTHI 223

  Fly   480 MNECIRSDSLESIGDVSSS 498
            .:|   |..|    ||||:
 Worm   224 SSE---SPQL----DVSSN 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 22/51 (43%)
ceh-30NP_508524.2 Homeobox 99..151 CDD:278475 22/51 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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