DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and ceh-27

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001256348.1 Gene:ceh-27 / 185853 WormBaseID:WBGene00000449 Length:263 Species:Caenorhabditis elegans


Alignment Length:180 Identity:44/180 - (24%)
Similarity:77/180 - (42%) Gaps:41/180 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTK 431
            :::|..::..|:..||::|..||||:...|..:|.::.||..|:||||||:|.|.|:..|     
 Worm    99 RKRRVLFSPQQVHVLERKFQINRYLSAADRENLAKSINLSATQVKIWFQNQRYKCKRQEK----- 158

  Fly   432 NVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQS-----------QQQQTQQTPVMNECIR 485
               :|.:|..          ..|.:.:.....:....|           :::...:.|.|...:.
 Worm   159 ---EKKMDGG----------CYRDSDRDTDSDRDNDSSGSLGSSMSGIKKEEDEDRKPFMPSAVS 210

  Fly   486 SDSLESIGDVS----------SSLGNPPYIPAAPETTSSYPGSQQHLSNN 525
            ||: ..:.|:|          ||...||:. |.....::||.|..:||.:
 Worm   211 SDT-ACLPDISQQAFPYQMYPSSSYMPPFF-AYQAPPANYPPSTYNLSTS 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 22/55 (40%)
ceh-27NP_001256348.1 Homeodomain 99..155 CDD:459649 22/55 (40%)

Return to query results.
Submit another query.