DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and ceh-36

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_510365.1 Gene:ceh-36 / 181529 WormBaseID:WBGene00000457 Length:257 Species:Caenorhabditis elegans


Alignment Length:193 Identity:51/193 - (26%)
Similarity:89/193 - (46%) Gaps:36/193 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIK---IWFQNRRMKWKKDNKLP 428
            :|:||::.|.|:.:|||.|...:|....||..:|..:.|.:.:::   :||:|||.|.:.:.|:.
 Worm    56 RRERTSFNRGQLDQLEKVFRETQYPDVHRREALAKAINLPDGRVQVITVWFKNRRAKDRNNKKMD 120

  Fly   429 NTKNVRKKTVDANGNPTPVAKKPTK--------------RAASK--------KQQQAQQQQQSQQ 471
            ........:..:||:|...:|..||              .:|:|        .|.|.|||||.||
 Worm   121 GVHPGSTSSRSSNGSPHNESKPDTKSLGIHIPGTPEFNAHSAAKYEANSAVLSQLQQQQQQQLQQ 185

  Fly   472 QQTQ---QTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAP---ETTSSYPGS---QQHLSNN 525
            .:::   ..|:.:  .:.||.:|:...:.:.....|...||   ...|.:|.:   ||:.||:
 Worm   186 PKSELEDSKPLAD--TKYDSTQSLLPQAQAAAYASYATTAPYPYNYNSYFPSNFYYQQYGSND 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 19/54 (35%)
ceh-36NP_510365.1 Homeobox 59..115 CDD:395001 19/55 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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