DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and Nkx2-5

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_032726.1 Gene:Nkx2-5 / 18091 MGIID:97350 Length:318 Species:Mus musculus


Alignment Length:271 Identity:66/271 - (24%)
Similarity:108/271 - (39%) Gaps:87/271 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 GDSDSDEDLMAETTDGERIIYPWMKKIHV-AGVANGSYQPGMEPKRQ-RTAYTRHQILELEKEFH 386
            ||.|..:|..|:    ::.:....|.:.: ....:|:.:|....:|: |..:::.|:.|||:.|.
Mouse    97 GDPDPAKDPRAD----KKELCALQKAVELDKAETDGAERPRARRRRKPRVLFSQAQVYELERRFK 157

  Fly   387 YNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKP 451
            ..|||:...|.::|..|.|:..|:||||||||.|.|:..        :.:|::..|.|.|    |
Mouse   158 QQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQR--------QDQTLELLGPPPP----P 210

  Fly   452 TKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLESIGDVSS------------------- 497
            .:|.|                    .||:   :| |....:||.::                   
Mouse   211 ARRIA--------------------VPVL---VR-DGKPCLGDPAAYAPAYGVGLNAYGYNAYPY 251

  Fly   498 -SLG----NPPY----IPAAPETTSSYPGSQQHLSNNNNN----GSGNNNNNNNNNNSNLNNNNN 549
             |.|    :|.|    .||||      |.:|...::.|:|    |.|:.|...:......|:   
Mouse   252 PSYGGAACSPGYSCAAYPAAP------PAAQPPAASANSNFVNFGVGDLNTVQSPGMPQGNS--- 307

  Fly   550 NNQMGHTNLHG 560
                |.:.|||
Mouse   308 ----GVSTLHG 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 24/56 (43%)
Nkx2-5NP_032726.1 Homeodomain 144..194 CDD:459649 22/49 (45%)

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