DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and ceh-34

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_504419.1 Gene:ceh-34 / 178919 WormBaseID:WBGene00000455 Length:256 Species:Caenorhabditis elegans


Alignment Length:291 Identity:57/291 - (19%)
Similarity:91/291 - (31%) Gaps:91/291 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 LQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQL--------QELGMRLRCDDMGSENDDMS 300
            ||...||...|....|.:.     .::.|:|...|.|        :.|...|.|......|..:.
 Worm    34 LQTGRTEQLANFIYNLPQC-----YQVMESVLKAQALVYFTTQNWKMLYKLLECSKFSPHNHTVL 93

  Fly   301 EEDRLMLDRSPDELGSNDNDDDLGD----SDSDEDLMAETT-DGERIIYPWMKKIHVAGVANGSY 360
            :  .|.||....| .:...|.:||.    ....::....|. |||...|.:..|           
 Worm    94 Q--NLWLDAHYKE-AAKTKDRELGAVCKYRIRKKNPFPNTIWDGEETNYCFKSK----------- 144

  Fly   361 QPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDN 425
                         :|:.:.:..|:..|.....:||   :|....||..|:..||:|:|.:     
 Worm   145 -------------SRNVLRDAYKKCQYPSVEDKRR---LAQQTELSIIQVSNWFKNKRQR----- 188

  Fly   426 KLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQT--QQTPVMNECIRSDS 488
                                       :|||.:..:.:.:...|....:  :..|.||    .||
 Worm   189 ---------------------------ERAAGQLDRSSARSNDSDDGSSGCESKPPMN----IDS 222

  Fly   489 LESIGDVSSSLGNPPYIPA----APETTSSY 515
             .:...:.:|....||.|:    ||....||
 Worm   223 -PAPPPLPTSFDLQPYYPSPYTFAPHCDFSY 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 13/51 (25%)
ceh-34NP_504419.1 SIX1_SD 17..128 CDD:293483 21/101 (21%)
homeodomain 139..190 CDD:238039 15/109 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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