DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and php-3

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_499573.1 Gene:php-3 / 176640 WormBaseID:WBGene00004024 Length:275 Species:Caenorhabditis elegans


Alignment Length:345 Identity:82/345 - (23%)
Similarity:125/345 - (36%) Gaps:105/345 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 NYANATPPSHPHSHPH-AHPHQSLGYYVHH--APEFISAGAVHSDPTNGYGP-AANVPNTSNGGG 190
            |.:|..||....|..| .|.......::..  :|...|:.|..:...|.:.. ||.:..:.:|..
 Worm    10 NNSNMPPPFVKSSDSHETHDESPTSPFIKRSDSPATTSSAAAAAMQHNFWSTRAAQLQQSVSGSS 74

  Fly   191 GGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHS-------QMMDLPLQCSS 248
            |..||:                     ..:|:.::..|.:..||...       |:..||.. |.
 Worm    75 GVSSGS---------------------SSSASNNLSRTQADNHSERGSDTASSPQVAPLPTS-SG 117

  Fly   249 TEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSE------------ 301
            ...|...|.|:....            ||:...|..|.:   :....||..|.            
 Worm   118 MSMPAAAAAGMYPFN------------AGRFPTEFNMMV---NQSMYNDFYSNSLAASSWPYSYP 167

  Fly   302 EDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEP 366
            :.....:.|...|..|.|                  ||.::  .|....|..             
 Worm   168 QQYPFANYSMPSLDGNLN------------------DGGQL--EWTSSSHAM------------- 199

  Fly   367 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTK 431
            :::|..||:.|.|||||||.||.|:::::|.|:|..|.|:|||:||||||||||.||.       
 Worm   200 RKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQ------- 257

  Fly   432 NVRKKTVDANGNPTPVAKKP 451
              :::|   :|:||.:...|
 Worm   258 --KQRT---SGDPTGMLMPP 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 32/51 (63%)
php-3NP_499573.1 Homeobox 202..256 CDD:365835 32/53 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.