DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and ceh-45

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_490823.1 Gene:ceh-45 / 171689 WormBaseID:WBGene00022837 Length:229 Species:Caenorhabditis elegans


Alignment Length:142 Identity:33/142 - (23%)
Similarity:59/142 - (41%) Gaps:9/142 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   345 PWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQ 409
            |:|...|      ..:......:|.||.::..|:..||..|....|.....|.|:|....|.|.:
 Worm    94 PFMAPYH------HQHYASRRKRRHRTIFSEEQLNILETTFSTTHYPDATTREELAVQCSLKEER 152

  Fly   410 IKIWFQNRR---MKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQ 471
            :::||:|||   .|.|||:...:..:......|.:...|...|:..:..:|.|:..:.:.:.|.:
 Worm   153 VEVWFKNRRAKERKQKKDDSRTSKHSGDDSECDESDEDTRKVKRIKRENSSGKETSSPESKASLK 217

  Fly   472 QQTQQTPVMNEC 483
            ....:..|:..|
 Worm   218 TSHSENLVLEPC 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 18/54 (33%)
ceh-45NP_490823.1 Homeobox 112..166 CDD:365835 17/53 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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