DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and Hoxa7

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_034585.1 Gene:Hoxa7 / 15404 MGIID:96179 Length:229 Species:Mus musculus


Alignment Length:335 Identity:97/335 - (28%)
Similarity:142/335 - (42%) Gaps:116/335 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 SLGYYVHHAPEFISAGA---VHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANG--- 209
            |..|||:......:|||   .:::||:    .:..||:...|.|.|:||.  ...|.|..|.   
Mouse     2 SSSYYVNALFSKYTAGASLFQNAEPTS----CSFAPNSQRSGYGPGAGAF--ASTVPGLYNVNSP 60

  Fly   210 -YYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEA 273
             |...:..|||..               :...:||  |:|                     .::.
Mouse    61 LYQSPFASGYGLG---------------ADAYNLP--CAS---------------------YDQN 87

  Fly   274 VPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTD 338
            :|        |:   |.|:..                    |:.|.        :||.::....:
Mouse    88 IP--------GL---CSDLAK--------------------GACDK--------ADEGVLHGPAE 113

  Fly   339 GERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTL 403
            ....|||||:            ..|.:.||.|..|||:|.||||||||:||||||||||||||.|
Mouse   114 ASFRIYPWMR------------SSGPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHAL 166

  Fly   404 VLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPT--PVAKKPTKRAASKKQQQAQQQ 466
            .|:|||||||||||||||||::|            |.:..||  |....|:...|:.|..:.:::
Mouse   167 CLTERQIKIWFQNRRMKWKKEHK------------DESQAPTAAPEDAVPSVSTAADKADEEEEE 219

  Fly   467 QQSQQQQTQQ 476
            ::.::::.::
Mouse   220 EEEEEEEEEE 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 43/51 (84%)
Hoxa7NP_034585.1 Antp-type hexapeptide 118..123 4/4 (100%)
Homeobox 133..185 CDD:278475 43/51 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..229 9/54 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.