DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and Hoxa6

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_034584.1 Gene:Hoxa6 / 15403 MGIID:96178 Length:232 Species:Mus musculus


Alignment Length:124 Identity:66/124 - (53%)
Similarity:83/124 - (66%) Gaps:14/124 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 SPDELGSNDNDDDLGDSDSDEDLMAETTDGERI--IYPWMKKIH-VAGVANGSYQPGMEPKRQRT 371
            ||::....|.      |...:.|..|.||.:..  :||||:::: .||...||:     .:|.|.
Mouse   106 SPEQQYKPDG------SVQGKALHEEGTDRKYTSPVYPWMQRMNSCAGAVYGSH-----GRRGRQ 159

  Fly   372 AYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNT 430
            .|||:|.||||||||:|||||||||||||:.|.|:|||||||||||||||||:|||.|:
Mouse   160 TYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINS 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 42/51 (82%)
Hoxa6NP_034584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..126 5/25 (20%)
Antp-type hexapeptide 135..140 3/4 (75%)
Homeobox 158..210 CDD:278475 42/51 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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