DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and Dmbx1

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_017175446.1 Gene:Dmbx1 / 140477 MGIID:2153518 Length:389 Species:Mus musculus


Alignment Length:216 Identity:51/216 - (23%)
Similarity:90/216 - (41%) Gaps:65/216 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 KRQRTAYTRHQILELEKEF---HYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLP 428
            :|.|||:|..|:..|||.|   ||...:.|.|   :|....|.|.::::||:|||.|::|..:..
Mouse    80 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRER---LAMCTNLPEARVQVWFKNRRAKFRKKQRSL 141

  Fly   429 NTKNVRKK----------TVDANGNPT----------PVAKKPTKRAASKKQQQA---------- 463
            ..:.::|:          .|:|..:.|          |....|.:...|..:|.|          
Mouse   142 QKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQPPGLPSGDPPAELQLSLSEQSASESAPEDQLD 206

  Fly   464 -QQQQQSQQQQTQQTPVMNE----CIR-SDSLESIGDVSSSLGNPPYIPAAP--------ETTSS 514
             ::..::::.:.:::|....    |.| |...:|.|.::.:       ||||        .:.||
Mouse   207 REEDSRAEEPKAEKSPGSESKVPGCKRGSPKADSPGSLAIT-------PAAPGGGLLGPSHSYSS 264

  Fly   515 YPGS--------QQHLSNNNN 527
            .|.|        :||::..||
Mouse   265 SPLSLFRLQEQFRQHMAATNN 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 22/54 (41%)
Dmbx1XP_017175446.1 Homeobox 82..136 CDD:365835 22/56 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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