DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and cad

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_061512454.1 Gene:cad / 1279024 VectorBaseID:AGAMI1_005797 Length:415 Species:Anopheles gambiae


Alignment Length:484 Identity:127/484 - (26%)
Similarity:170/484 - (35%) Gaps:153/484 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 HSHTHSLPHHHSNSAISGHHQASAGGYSSNYANATPPSHP---------------HSHPHA-HPH 149
            ::|....|.:||.:.   .:.|:.|.|.|||.:  .|.||               :.|||. ||.
Mosquito     5 YNHFAMYPKNHSGNL---PYSATTGWYPSNYQH--QPPHPQFIGDGESSPQPAMYYPHPHVFHPQ 64

  Fly   150 QSLGYYVHH---APEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGA--VGGSAN- 208
            .|..:..|.   .|...|.|..|       ||:.....|.:||.|||||.: |.||  :|.:.| 
Mosquito    65 SSPDWSSHENFSTPPQTSFGLSH-------GPSPGAGGTGSGGSGGGSGGI-GSGALHLGQNPNL 121

  Fly   209 ------GYYGGYGGGYGTANGSVGSTHSQ-GHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKL 266
                  .::|..|||.|...||.|:.|.. ....||    :|      .||...           
Mosquito   122 HHHHHHHHHGNNGGGNGGGGGSGGNAHDHLADGLHS----IP------SPPITV----------- 165

  Fly   267 EKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDED 331
                     :|..:...|.     ..||.:..::.....:  :||                    
Mosquito   166 ---------SGSDMSSPGA-----PTGSSSPQITPRPTPV--KSP-------------------- 194

  Fly   332 LMAETTDGERIIYPWMKK------IHVAGVANGSYQPGME-------------PKRQRTAYTRHQ 377
                        |.||||      .:..|:.|....|.::             ..:.|..||..|
Mosquito   195 ------------YEWMKKQSYQSQPNPGGLINICSAPSLQDFAPVESGGKTRTKDKYRVVYTDQQ 247

  Fly   378 ILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANG 442
            .|||||||||.||:|.||:.|:|..|.|||||:||||||||.|.:|..|...|.:|........|
Mosquito   248 RLELEKEFHYTRYITIRRKAELAQNLQLSERQVKIWFQNRRAKDRKQKKKAETGSVGGGMGGLGG 312

  Fly   443 NPTPVA-----KKPTKRAASKKQQQAQQQQQSQQQQTQQT-PVMNECIRSDSLESIGDVSSSLG- 500
            ..:.||     ..|...||           ||.......| |.:...:....|..:..:|..:| 
Mosquito   313 GQSLVAAHAQGHNPHGGAA-----------QSMSALLADTKPKLEPSLHLSHLHQMSAMSMGMGS 366

  Fly   501 -----NPPYIPAAPETTSSYPGSQQHLSN 524
                 :.|...||.......|.||.|..|
Mosquito   367 MGLHHHHPGHHAALHAHLGVPTSQHHQLN 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 35/55 (64%)
cadXP_061512454.1 None

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