DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and Phox2a

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_446321.2 Gene:Phox2a / 116648 RGDID:621323 Length:281 Species:Rattus norvegicus


Alignment Length:174 Identity:49/174 - (28%)
Similarity:72/174 - (41%) Gaps:51/174 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 GMEPKRQ----RTAYTRHQILELEKEF---HYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMK 420
            |:..||:    ||.:|..|:.|||:.|   ||....||.   |:|..:.|:|.::::||||||.|
  Rat    83 GLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTRE---ELALKIDLTEARVQVWFQNRRAK 144

  Fly   421 WKKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIR 485
            ::|..:..:.|.    ...|.|     |||...|.:|       :...|::.....||       
  Rat   145 FRKQERAASAKG----AAGATG-----AKKGEARCSS-------EDDDSKESTCSPTP------- 186

  Fly   486 SDSLESIGDVSSSLGNPPYIPA----------APETTSSYPGSQ 519
                    |.::||..||..|:          .|....|.||.|
  Rat   187 --------DSTASLPPPPPAPSLASPRLSPSPLPAALGSGPGPQ 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 23/54 (43%)
Phox2aNP_446321.2 Homeobox 94..147 CDD:395001 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..219 20/104 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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