Protein Alignment Dfd and Hoxd11

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: XP_008760183.3
• Gene: Hoxd11 / 102553842
• RGDID: 7730597
• Length: 336
• Species: Rattus norvegicus
• Alignment Length: 362
• Identity: 93/362 - (25%)
• Similarity: 127/362 - (35%)
• Gaps: 118/362 - (32%)

  Fly   127 YSSNYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYG-PAANVPNTSNGGG 190
            ||||.|           ||..|.:.:.:                   ..|| ..|..|....|||
  Rat    47 YSSNLA-----------PHVQPVREVAF-------------------RDYGLERAKWPYRGGGGG 81

  Fly   191 GGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHS--------PHSQMMDLPLQ-- 245
            |.|.|   |||..||...| .|||...|..|..:..:..:...:        |..:..|:..:
  Rat    82 GAGGG---GGGGPGGGGGG-SGGYAPYYAAAAAAAAAAAAAEEAAMQRDLLPPAGRRPDVLFKAP 142

  Fly   246 ---CSSTEPPTNTAL------------GLQELGLKLEKRIEEAVP----AGQQLQELGMRLRCDD 291
               |.:..||...|.            |:...|.   .:..||.|    ||.|.|.
  Rat   143 EPVCGAPGPPHGPAAAASNFYSAVGRNGILPQGF---DQFYEAAPGPPFAGPQPQP--------- 195

  Fly   292 MGSENDDMSEEDRLMLDRSPDELGSND-NDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGV 355
                           ....|...|:.| .|...|.........::.|.|     |..|.....|.
  Rat   196 ---------------APAPPQPEGAADKGDPKAGAGGGGGSPCSKATPG-----PEPKGAAEGGG 240

  Fly   356 ANGSYQPG----------MEPKR---QRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSE 407
            ..|...||          :.|:|   :|..||::||.|||:||.:|.|:.:.:|::::..|.|::
  Rat   241 GEGEGPPGEAGAEKSGGTVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTD 305

  Fly   408 RQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNP 444
            ||:||||||||||.||.|        |.:.....|||
  Rat   306 RQVKIWFQNRRMKEKKLN--------RDRLQYFTGNP 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	27/51 (53%)
Hoxd11	XP_008760183.3	DUF3528	26..187	CDD:403310	40/176 (23%)
		Homeobox	267..321	CDD:395001	27/53 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000