Protein Alignment Dfd and Hoxa4

DIOPT Version :9

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: NP_077326.1
• Gene: Hoxa4 / 100912525
• RGDID: 2814
• Length: 285
• Species: Rattus norvegicus
• Alignment Length: 462
• Identity: 140/462 - (30%)
• Similarity: 163/462 - (35%)
• Gaps: 209/462 - (45%)

  Fly     1 MSSFLMGYPHAPHHVQSPMSMGNGLDPKFPPLADDYHHYNGHYSMTASTGHMSGAVGGGAGVGSV 65
            |||||:.              .|.::|||||..:...|                  ||..|
  Rat     3 MSSFLIN--------------SNYIEPKFPPFEEFAPH------------------GGPGG---- 31

  Fly    66 GGGGAGGMTGHPH---SMH-PADMVSDYMAHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGG 126
            |.||.||..|:|.   |.| ||.          |||:...:..:..|.....|...|.:.|.|..
  Rat    32 GDGGVGGGPGYPRPQSSPHLPAP----------NPHAARQTPAYYAPRAREPSYHGGLYPAPAAA 86

  Fly   127 --YSSNYAN-ATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNG 188
              |:...|: |.|...|  .|.|||..        ||:       ...|.....|....|
  Rat    87 CPYACRGASPARPEQSP--APGAHPSP--------APQ-------PPAPPRRCAPGPTTP----- 129

  Fly   189 GGGGGSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPT 253
                   ||    |.||||
  Rat   130 -------AV----ATGGSA---------------------------------------------- 137

  Fly   254 NTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSND 318
                              .|.|.                            |:.|:.|
  Rat   138 ------------------PACPL----------------------------LLADQGP------- 149

  Fly   319 NDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEK 383
                           |.....|.::|||||||||:.| |.||..| ||||.||||||.|:|||||
  Rat   150 ---------------AGPKGKEPVVYPWMKKIHVSAV-NPSYNGG-EPKRSRTAYTRQQVLELEK 197

  Fly   384 EFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVA 448
            |||:||||||||||||||||.|||||:||||||||||||||:||||||.       .:.||....
  Rat   198 EFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPNTKM-------RSSNPASAP 255

  Fly   449 KKPTKRA 455
            ..|..:|
  Rat   256 AGPPGKA 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeobox	370..422	CDD:278475	46/51 (90%)
Hoxa4	NP_077326.1	Homeobox	183..236	CDD:278475	46/52 (88%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910