Protein Alignment Dfd and hoxc10a

DIOPT Version :10

• Sequence 1: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Sequence 2: XP_017208987.1
• Gene: hoxc10a / 100535576
• ZFINID: ZDB-GENE-990415-110
• Length: 337
• Species: Danio rerio
• Alignment Length: 429
• Identity: 104/429 - (24%)
• Similarity: 166/429 - (38%)
• Gaps: 140/429 - (32%)

  Fly    30 PPLADDYHHYNGHYSMTASTGHMSGAVGGGAGVGSVGGGGAGGMTGHPHS----MHPADMVSDYM 90
            |...:.|...:|.|..|:       |..|.:.:||.      |:.|.|.|    :.|:.|
Zfish    23 PFRGESYSSNSGMYMQTS-------AEYGCSMMGSF------GIVGTPLSKRDDLQPSGM----- 69

  Fly    91 AHHHNPHSHSHSHTHSLPHHHSNSAISGHHQASAGGYSSNYANATP---PSHPHSHPHAHPHQSL 152
                  |..|:.|:|.|...  ::.|:|         |..|..:.|   |.||.|.|.::..:..
Zfish    70 ------HLGSYQHSHYLSQR--DTWIAG---------SKTYRGSQPVAQPLHPCSFPASNVKEEA 117

  Fly   153 --GYY---VHHAPE------FISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGS 206
              ..|   :..|.|      :|..|..:|.|...   |.:.|:            ......|..|
Zfish   118 IPCLYQPDIDSAKESGEKSTYIRLGDNNSHPNQS---AVSTPD------------YFRRSQVYAS 167

  Fly   207 ANGYYGG-YGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRI 270
            ..|::|. :|..:.                       |:      |..:|.:
Zfish   168 ERGHHGDEFGSDFN-----------------------PI------PRISTPV------------- 190

  Fly   271 EEAVPAGQQLQELGMRLRCDDMG--SENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLM 333
             ||:.:...::....|...:|.|  ::.|||.:..    .|..:.:...::..|    ||:.:|.
Zfish   191 -EALASDSCVKSSKARQHPEDKGGNTQEDDMDQRQ----TRKEESVSKTESCTD----DSESELK 246

  Fly   334 AETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIE 398
            .|:.         ::|      |.|::......:::|..||:||.|||||||.:|.||||.||:|
Zfish   247 DESK---------LEK------ATGNWLKAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLE 296

  Fly   399 IAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKT 437
            |:.::.|::||:||||||||||.||.|:   ...||:.|
Zfish   297 ISKSINLTDRQVKIWFQNRRMKLKKLNR---ESRVRELT 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	34/55 (62%)
hoxc10a	XP_017208987.1	Homeodomain	265..321	CDD:459649	34/55 (62%)