DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and nobox

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_031761569.1 Gene:nobox / 100494031 XenbaseID:XB-GENE-22068768 Length:652 Species:Xenopus tropicalis


Alignment Length:189 Identity:51/189 - (26%)
Similarity:83/189 - (43%) Gaps:38/189 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 ANGSYQPGMEP--KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRR 418
            |:...:|| .|  |:.||.|:..|:.|||:.|..:.|....:|.|||..:.::.::|.:||||||
 Frog   248 ADAPEEPG-PPCRKKSRTLYSMDQLQELERLFAEDHYPDSEKRREIAEIIGVTPQRIMVWFQNRR 311

  Fly   419 MKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNEC 483
            .||:|         |.|.::..       .:||...|...:.:.|.....|....::...|    
 Frog   312 AKWRK---------VEKTSIKG-------PRKPLSAAGMSRPETAVLTVSSSVALSRPEAV---- 356

  Fly   484 IRSDSLES-----------IGDVSSSLGNPPYIPAAPETTSSYPGSQQHLSNNNNNGSG 531
              |.|:.|           :|.|.:.....|  .:|..|:.|..||.||.::.:::.||
 Frog   357 --SLSVTSGFHTYGSAFPPVGGVRNGFSMVP--GSALPTSQSSDGSSQHSASCSSSSSG 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 21/51 (41%)
noboxXP_031761569.1 COG5576 <252..364 CDD:227863 38/134 (28%)
Homeobox 262..316 CDD:395001 22/53 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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