DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and pou2f3

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_031762183.1 Gene:pou2f3 / 100490595 XenbaseID:XB-GENE-853632 Length:506 Species:Xenopus tropicalis


Alignment Length:530 Identity:93/530 - (17%)
Similarity:162/530 - (30%) Gaps:185/530 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 PPSHPHSHPHAHPHQSLGY-----------YVHHAPEFIS--------------AGAVHSD---P 172
            |..|.....|..|.:.:.|           |.|..|..|:              :|.:.:|   .
 Frog    55 PAEHIEPGEHIEPEEYILYVSLPCMMVNLQYTHPVPSHINMSREPDSTVEQQHGSGNLENDTERD 119

  Fly   173 TNGYGPAANVPNTSNGGGGG--------GSGAVLGGGAVGGSANGYYGGYGGGYGTANGSVGSTH 229
            |..:|......:.|.....|        ..|:::|||.:                  :|.:.|.|
 Frog   120 TLDFGKQIKTEDFSEALQSGIPHRPCHLSQGSMIGGGQM------------------SGEMTSLH 166

  Fly   230 SQGHSPHSQMMDLPLQCSSTEP---------------PTNTALGLQELGLKLEKRIEEAVPAGQQ 279
                 |..|::.:|.......|               |.:.:|..|:.|:     ::.....|..
 Frog   167 -----PLQQLVLVPSHLQPASPYLLSQSQSGQQGLLQPNHLSLSQQQGGI-----LQPQTGLGLA 221

  Fly   280 LQELGMRLRCDDMGSENDDMSEEDRLMLDRS----PDE--------------------LGSNDND 320
            .|.:|   |....||..:...|...|.:.:.    |||                    ||....|
 Frog   222 SQAVG---RPGLPGSPLESHLEMGHLHVPKHLPMVPDEPSDLEELEKFAKTFKQRRIKLGFTQGD 283

  Fly   321 DDLGDSDSDEDLMAETTDG---------------ERIIYPWMKKIHVAGVANGSYQPGM------ 364
            ..|.......:..::||..               :.::..|:.....| .::.:..|..      
 Frog   284 VGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESA-PSDAALTPSTNYAQLS 347

  Fly   365 ----EPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDN 425
                ..:::||:...:..|.|||.|..|...:......||..||:.:..:::||.|||.|.|:.|
 Frog   348 EMFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLVMEKEVVRVWFCNRRQKEKRIN 412

  Fly   426 KLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLE 490
            ...|.                    |.|                       :||.|.  |.....
 Frog   413 CPMNL--------------------PLK-----------------------SPVYNS--RMAPTG 432

  Fly   491 SIGDVSSSLGNPPYIPAAPETTSSYPGSQQHLSNNNNN------GSGNNNNNNNNNNSNLNNNNN 549
            .:|.:|.:.|:...  .:..|:|..|||....|:.::.      ||..|::....|.|:.:|:::
 Frog   433 PLGTMSMTPGHSTM--TSTVTSSCSPGSSSRPSSPSSGLQPSSPGSSLNSSKPTVNTSSYSNSSS 495

  Fly   550 NNQMGHTNLH 559
            ..:..|:..:
 Frog   496 WYRWNHSQYY 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 18/51 (35%)
pou2f3XP_031762183.1 POU 255..329 CDD:197673 9/73 (12%)
Homeobox 356..410 CDD:395001 18/53 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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