DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and plppr4

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002933836.2 Gene:plppr4 / 100489346 XenbaseID:XB-GENE-976836 Length:721 Species:Xenopus tropicalis


Alignment Length:568 Identity:108/568 - (19%)
Similarity:161/568 - (28%) Gaps:212/568 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 HSHTHSLPHHHSNSAISGHHQASAGGYSSNYANAT--------PPSHPHSHPHAHPHQSLGYYVH 157
            :|...|.|..|:..|      |.|..|.|.|.|||        .|....|               
 Frog   194 NSGRKSFPSQHATLA------AFAAVYISMYFNATLTDSSKLLKPLLVFS--------------- 237

  Fly   158 HAPEFISAGAV---------HSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGG--------AVGG 205
                ||..|.:         .:.|.:.|                 ||.:||||        |||.
 Frog   238 ----FIICGIICGLTRITQYKNHPIDVY-----------------SGFLLGGGIAIYLGLYAVGN 281

  Fly   206 ----------------------------SANGYYGGYGGGY--GTANGSVGSTHSQGHSPHSQMM 240
                                        .||....|..|..  |.|...|.:..::.|...|.:.
 Frog   282 FQPSEDNIPQKPPPPLREPLRSLTEISQDANRILPGKNGNSTDGIAAHHVENILTRNHRESSSLT 346

  Fly   241 DLPLQCSSTEPPT--------------NTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDD 291
            ::....:..|..|              ||...:....|:...|....:.|...      ..|...
 Frog   347 NIKRASTDVEVITPRSPMGKENMVTFSNTLPRVHTPSLEDPARRNATIHASMD------SARSKQ 405

  Fly   292 MGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVA 356
            :.|:....:|..:|.|.....|.|.  :...:.:..|..:.:....:||.|           |..
 Frog   406 LLSQWKTKNESRKLSLQVIETEAGL--SPQRIIEMRSSSEPVRVGVNGEHI-----------GPG 457

  Fly   357 NGSY---QPGMEPKRQRTAYT------------RHQILELEKEFHYNRYLTRRRRIEIAHTLVLS 406
            | ||   |||..|....|...            ..|::.:.:|.|.| .||...:...|      
 Frog   458 N-SYLKLQPGSVPGCNNTGIPGGPRVSIQSRPGSSQLVHIPEETHEN-ILTTSPKCSSA------ 514

  Fly   407 ERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQ 471
                       |.||.|         |.:|:|....|..|...:..  |.||:|...|...:|.:
 Frog   515 -----------RSKWLK---------VAEKSVVCRSNSQPRIMQVI--AMSKQQGMLQGSPKSSE 557

  Fly   472 QQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAPETTSSYPGSQQHLSNNNNNGSG----- 531
            ..|.      .|..|...:::.:...:  |...|.|.||  ::.|..|..|   ...|||     
 Frog   558 GSTV------SCTGSIRYKALTEHEPT--NIVRIEAHPE--NNRPIIQMPL---EGEGSGSWKWK 609

  Fly   532 -------------NNNNNNNNNNSNLNNNNNNNQMGHTN------LHG 560
                         |:.|.::.:..:|.::....:...:|      |||
 Frog   610 APEKGTLRQAYELNDLNRDSESCESLKDSFGTTERKRSNIENDHLLHG 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 10/63 (16%)
plppr4XP_002933836.2 PAP2_wunen 126..275 CDD:239479 26/122 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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