DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hmx2

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:166 Identity:46/166 - (27%)
Similarity:64/166 - (38%) Gaps:52/166 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 LRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSD-----------------------S 328
            :.|....|:.|:..|..|          |...|..|.||.|                       |
 Frog    44 ISCPSTSSDEDEQDESWR----------GHGCNCPDPGDKDSKGQAPHPCGAHRCPNRTQMPSPS 98

  Fly   329 DEDLMAETTD------GERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHY 387
            .:|...|...      |:|         |    .:|..:.|...|:.||.::|.|:.:||..|..
 Frog    99 QQDYTEEKDSHYPQSLGDR---------H----KDGGDKMGNSKKKTRTVFSRSQVYQLESTFDM 150

  Fly   388 NRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK 423
            .|||:...|..:|.:|.|:|.|:|.||||||.|||:
 Frog   151 KRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKR 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 24/51 (47%)
hmx2XP_002937849.1 Homeobox 132..186 CDD:365835 25/53 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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