DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and LOC100486032

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002934006.1 Gene:LOC100486032 / 100486032 -ID:- Length:255 Species:Xenopus tropicalis


Alignment Length:180 Identity:58/180 - (32%)
Similarity:93/180 - (51%) Gaps:34/180 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 WMKK---IHVAGVANGSYQPGMEPK--RQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVL 405
            |::.   :|.....:.|.|||:..|  |.|||:|..|:||||.:|..|:||:|.:|.|:|.:|:|
 Frog    99 WLRAGLLLHRGPDLHASAQPGLMGKCRRPRTAFTSQQLLELENQFKANKYLSRPKRFEVATSLML 163

  Fly   406 SERQIKIWFQNRRMKWKKDNKL----PNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQ 466
            :|.|:||||||||||||:..|.    |:.:..|.:   |.|           :..||:.::.::.
 Frog   164 TETQVKIWFQNRRMKWKRSRKAKEQGPSEQGDRPR---AGG-----------KTLSKEDEEEEED 214

  Fly   467 QQSQQQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYIPAAPETTSSYP 516
            ::...||        |...:|.|.....:|.|   |.::.:..|..::.|
 Frog   215 EEGDFQQ--------EGRGTDMLRHGTQLSYS---PEFLCSEEEENATVP 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 31/51 (61%)
LOC100486032XP_002934006.1 Homeobox 127..181 CDD:365835 32/53 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.