DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dfd and LOC100485697

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002939439.1 Gene:LOC100485697 / 100485697 -ID:- Length:266 Species:Xenopus tropicalis


Alignment Length:291 Identity:67/291 - (23%)
Similarity:112/291 - (38%) Gaps:57/291 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 GHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSEN 296
            |:.|   ::.:|.|.....|...|...:...                 |.:..:|..|....:.:
 Frog    15 GYGP---LVQMPHQTCLQPPMAPTGFSMTHC-----------------LPQNPIRTCCPGTYTNS 59

  Fly   297 DDM-SEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGV----- 355
            .|: |.:|.:   |:.|..|.|            :|:  ......|||.|....:..||.     
 Frog    60 GDLPSYQDNI---RNTDWYGGN------------QDM--HYPPFSRIITPSGFNVSTAGCLGYLT 107

  Fly   356 ---ANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNR 417
               .:..|......:::|..:::.|:.||||.|.:.:|||...|.::|..:.|:..|:||||||.
 Frog   108 EGPKHSLYLQHTSKRKRRVLFSQAQVYELEKRFEHQKYLTAPEREQLAKHIHLTPNQVKIWFQNH 172

  Fly   418 RMKWKKD--NKLPNTKNVRKK-TVDANGNPTPVAKKPTK-----RAASKKQQQAQQQQQSQQQQT 474
            |.|.|:.  |..|..:...|. :|::||:........|.     .|..|...:...|:  ||..|
 Frog   173 RYKMKRQARNHDPLAEEEAKSYSVESNGSKVACGSPCTSVEDYGPAEIKLDYKGSVQE--QQLNT 235

  Fly   475 QQTPVMNECIRSDS-LESIGDVSSSLGNPPY 504
            |...:..:.:.|.| |:.....|.:|...|:
 Frog   236 QGILLGQDFLNSASDLQDFEKASRNLMFKPW 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 22/51 (43%)
LOC100485697XP_002939439.1 Homeobox 124..178 CDD:365835 22/53 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.