DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxa6

DIOPT Version :9

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002933441.2 Gene:hoxa6 / 100485428 XenbaseID:XB-GENE-481964 Length:237 Species:Xenopus tropicalis


Alignment Length:135 Identity:62/135 - (45%)
Similarity:80/135 - (59%) Gaps:23/135 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 SPDELGS---NDNDDDLGDSDSDEDLMAETTDGERI------------IYPWMKKIHVAGVANGS 359
            ||...|:   .|:.:.|..|...:...:.:..|:.:            :||||:::      |..
 Frog    88 SPSSYGTKHRGDSGEYLHFSADQQQYKSASAQGKMLHEEPTDRKYSSPVYPWMQRV------NSC 146

  Fly   360 YQP--GMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 422
            ..|  |...:|.|..|||.|.||||||||:|||||||||||||:.|.|:||||||||||||||||
 Frog   147 TGPVYGAHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 211

  Fly   423 KDNKL 427
            |::||
 Frog   212 KESKL 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeobox 370..422 CDD:278475 42/51 (82%)
hoxa6XP_002933441.2 Homeobox 159..212 CDD:365835 43/52 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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