DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dfd and hoxd8

DIOPT Version :10

Sequence 1:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001135589.1 Gene:hoxd8 / 100216142 XenbaseID:XB-GENE-920113 Length:231 Species:Xenopus tropicalis


Alignment Length:125 Identity:57/125 - (45%)
Similarity:74/125 - (59%) Gaps:26/125 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 IYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSE 407
            ::|||:    |.||.|.       :|.|..|:|.|.|||||||.:|.||||:||||::|.|.|:|
 Frog   127 MFPWMR----AQVAPGR-------RRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHALGLTE 180

  Fly   408 RQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQ 467
            ||:|||||||||||||:|               :.:..||:.:..|..|.||....|:||
 Frog   181 RQVKIWFQNRRMKWKKEN---------------SKDKFPVSSQEGKEEADKKGGLHQEQQ 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 38/55 (69%)
hoxd8NP_001135589.1 Homeodomain 140..196 CDD:459649 38/55 (69%)

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