DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and zgc:165604

DIOPT Version :10

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001091725.1 Gene:zgc:165604 / 792578 ZFINID:ZDB-GENE-070615-34 Length:298 Species:Danio rerio


Alignment Length:325 Identity:67/325 - (20%)
Similarity:105/325 - (32%) Gaps:113/325 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLIGLIFCLAISLDSVLSAPVISQISKDVVASVGDSVEFNC---TVEEVGQLSVSWAKRPSESDT 75
            |.:|.:..:.:...:|  ...:.:.|.:||.  ||||...|   |:..:.:||:.|...|. ||.
Zfish     9 LWLGCLVSMFLQYGAV--RVTVRESSLEVVQ--GDSVTLPCSFFTMMPLFRLSIIWTLTPL-SDP 68

  Fly    76 NS----VVLSMRNILSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVT 136
            ||    :|.....:...|.....|.....|.:...|..:    ..|||.|.|.|           
Zfish    69 NSPIQVIVYDQGQVTENPSFMGRVGFAGMPWSADIILNY----TRVSDAGVYRC----------- 118

  Fly   137 KKLSLQIKTPPVIAENTPKSTLVTEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHLLAEPTL 201
                        :..|.|::.....|: |.||                          :||.|:|
Zfish   119 ------------VVSNPPETGDPGIGE-LSLT--------------------------VLAPPSL 144

  Fly   202 RIRSVHRMDRGGYYCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELECSV-QGYP 265
            .:            |:   .||..|                        ...:..|.|.| :|:|
Zfish   145 PM------------CL---WEGDTD------------------------TGGNVRLSCVVAEGFP 170

  Fly   266 APTVVWHKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEEDFGDYYCNATNKLGHADARLHL 330
            .|.|:|.|    |:..:   :....:..|..|..:.|.:|..:..|.|.|:.||.||.....::|
Zfish   171 TPQVIWEK----LEPDK---MTLPVNMDGDMTGSVHIANVSTQSSGLYRCSVTNSLGTQHCYINL 228

  Fly   331  330
            Zfish   229  228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:400151 28/116 (24%)
Ig strand B 50..54 CDD:409353 1/3 (33%)
Ig strand C 63..68 CDD:409353 2/4 (50%)
Ig strand E 101..112 CDD:409353 2/10 (20%)
Ig strand F 122..127 CDD:409353 2/4 (50%)
Ig strand G 136..139 CDD:409353 0/2 (0%)
Ig_3 146..220 CDD:464046 11/73 (15%)
I-set 254..330 CDD:400151 21/76 (28%)
Ig strand B 255..259 CDD:409353 1/3 (33%)
Ig strand C 268..272 CDD:409353 1/3 (33%)
Ig strand E 298..302 CDD:409353 0/3 (0%)
Ig strand F 312..317 CDD:409353 2/4 (50%)
zgc:165604NP_001091725.1 Ig 24..124 CDD:472250 30/131 (23%)
Ig strand B 41..45 CDD:409353 1/3 (33%)
Ig strand C 57..61 CDD:409353 1/3 (33%)
Ig strand E 103..107 CDD:409353 1/3 (33%)
Ig strand F 115..120 CDD:409353 2/27 (7%)
IG_like 156..230 CDD:214653 22/80 (28%)
Ig strand B 159..163 CDD:409353 1/3 (33%)
Ig strand C 173..177 CDD:409353 1/3 (33%)
Ig strand E 196..200 CDD:409353 0/3 (0%)
Ig strand F 210..215 CDD:409353 2/4 (50%)

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