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Protein Alignment Ama and Kirrel3

DIOPT Version :9

Sequence 1:	NP_731114.2	Gene:	Ama / 40831	FlyBaseID:	FBgn0000071	Length:	341	Species:	Drosophila melanogaster
Sequence 2:	XP_006510620.1	Gene:	Kirrel3 / 67703	MGIID:	1914953	Length:	803	Species:	Mus musculus

Alignment Length:	309	Identity:	69/309 - (22%)
Similarity:	123/309 - (39%)	Gaps:	52/309 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    23 AISLDSVLSAPVISQISKDVVASVGDS-VEFNCTVE-EVGQLSVSWAKRPSESDTNSVVLSMRNI 85
            ::::|  :..|.:..:|.:....:.|: |.|:|:.: ........||||.            ..|
Mouse   241 SVTID--IQHPPLVNLSVEPQPVLEDNIVTFHCSAKANPAVTQYRWAKRG------------HII 291

  Fly    86 LSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKLSLQIKTPPVIA 150
            .....:.|..||.         ||:..:        |..|:| .:|........::.:...|.:.
Mouse   292 KEASGELYRTTVD---------YTYFSE--------PVSCEV-TNALGSTNLSRTVDVYFGPRMT 338

  Fly   151 ENTPKSTLVTEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSVHRMDRGGYY 215
             :.|:|.||..|.:...:|...|.|..||.|.:..:.|:     |..|.||.::||.:.|.|.|.
Mouse   339 -SEPQSLLVDLGSDAVFSCAWIGNPSLTIVWMKRGSGVV-----LSNEKTLTLKSVRQEDAGKYV 397

  Fly   216 C---IAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELECSVQGYPAPTVV---WHKN 274
            |   :.:.|.|:   |.:.:.|...|.|:..:.:.| :.....:::|.::..|.|..:   |.:|
Mouse   398 CRAVVPRVGAGE---REVTLTVNGPPIISSTQTQHA-LHGEKGQIKCFIRSTPPPDRIAWSWKEN 458

  Fly   275 GVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEEDFGDYY-CNATNKLG 322
            .:...:|..:.|....:..| ..|.|.|.::...||...| |.|.|..|
Mouse   459 VLESGTSGRYTVETVNTEEG-VISTLTISNIVRADFQTIYNCTAWNSFG 506

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.