DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and igsf9bb

DIOPT Version :9

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_009293693.1 Gene:igsf9bb / 569554 ZFINID:ZDB-GENE-091112-15 Length:1439 Species:Danio rerio


Alignment Length:244 Identity:74/244 - (30%)
Similarity:110/244 - (45%) Gaps:23/244 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 TFRIQNIEVSDMGPYECQVLVSATEKVT----KKLSLQIKTPPVIAENTPKSTLVTEGQNLELTC 169
            :.||:.:...|.|.|||:||:...:..|    ..:.|.:..||...:..|:.....||.::.|:|
Zfish    95 SLRIERVRSEDQGWYECKV
LMLEQQYHTFHNGSWVHLTVNAPPTFTDTPPQYVEAKEGGSITLSC 159

  Fly   170 HANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSVHRMDRGGYYCIA--QNGEGQPDKRLIRV 232
            .|.|.|||::||.||.|.|..:..:.:::.:|.:.|:.|.|||.|.|.|  :.||.....||:  
Zfish   160 TAFGNPKPSVSWLREGNPVQDSTKYKVSDGSLTLVSISREDRGAYTCRAYSEQGEAVHTTRLL-- 222

  Fly   233 EVEFRPQIAVQRPKIAQMVSHSAELECSVQGYPAP---TVVWHKNGVPLQSSRHHEVANTASSSG 294
             |:..|.|......|...:|..|...|..:.||..   |..|.::.|..::.....|:.....| 
Zfish   223 -V
QGPPFIVSPPENITVNISQDAFFTCQAEAYPGNLTYTWFWEEDNVFFKNDLKRRVSILIDGS- 285

  Fly   295 TTTSVLRIDSVGEEDFGDYYCNATNKLGH---ADARL--HLFQTVIPVP 338
                 |.|..|..||.|.|.|:.:|.||.   |.|.|  |....||.:|
Zfish   286 -----LIISQVKPEDAGKYTCSPSNSLGRPPSASAYLTVHYPARVINMP 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:254352 11/37 (30%)
Ig 37..127 CDD:299845 7/17 (41%)
IG_like 154..234 CDD:214653 29/81 (36%)
IGc2 161..223 CDD:197706 25/63 (40%)
I-set 254..330 CDD:254352 23/83 (28%)
IGc2 254..322 CDD:197706 18/70 (26%)
igsf9bbXP_009293693.1 IG_like 30..113 CDD:214653 7/17 (41%)
Ig 41..113 CDD:143165 7/17 (41%)
IG_like 144..223 CDD:214653 29/81 (36%)
IGc2 151..208 CDD:197706 23/56 (41%)
I-set 227..319 CDD:254352 27/97 (28%)
Ig <263..319 CDD:299845 18/61 (30%)
Ig_2 326..414 CDD:290606 2/4 (50%)
IG_like 329..403 CDD:214653 1/1 (100%)
IG_like 424..504 CDD:214653
Ig 440..504 CDD:299845
FN3 509..604 CDD:238020
FN3 620..704 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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