DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and babos

DIOPT Version :9

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001286719.1 Gene:babos / 37557 FlyBaseID:FBgn0034724 Length:196 Species:Drosophila melanogaster


Alignment Length:94 Identity:22/94 - (23%)
Similarity:39/94 - (41%) Gaps:22/94 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 SLQIKTP-PVIAENTPKSTLVT--EGQNLELTC------HANGFPKPTISWAREHNAVMPAGGHL 195
            |.|.|:| ||.:|...|:..||  .|:::.|.|      |::..   .:.|....|.:  :.|..
  Fly    51 SPQTKSPNPVASEKINKTLSVTGIRGEDVVLKCDVGSNLHSSDV---VVLWYFGDNVI--SNGKN 110

  Fly   196 LAEPTLRIRSVHRMD--------RGGYYC 216
            |.:|..::.:.:.:.        .|.|.|
  Fly   111 LVQPNFKLDANYDLTILKASPQVAGSYLC 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:254352 1/2 (50%)
Ig 37..127 CDD:299845
IG_like 154..234 CDD:214653 15/79 (19%)
IGc2 161..223 CDD:197706 12/70 (17%)
I-set 254..330 CDD:254352
IGc2 254..322 CDD:197706
babosNP_001286719.1 ig 70..154 CDD:278476 14/75 (19%)
IG_like 70..154 CDD:214653 14/75 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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