DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and Lac

DIOPT Version :10

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster


Alignment Length:318 Identity:121/318 - (38%)
Similarity:206/318 - (64%) Gaps:10/318 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LAISLDSVLS--APVISQISKDVVASVGDSVEFNCTVEEVGQLSVSWAKRPSESDTNSVVLSMRN 84
            |||.:...|:  .|.||.|:::.:..:|.:|||:|:|:...:.:|.:.|    :|::.|.||..:
  Fly    16 LAIFVQQTLAQRTPTISYITQEQIKDIGGTVEFDCSVQYAKEYNVLFLK----TDSDPVFLSTGS 76

  Fly    85 ILSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKLSLQIKTPPVI 149
            .|.:.|.|:::..    ...|:.|..:|::|:.:|.|.|.|||::|...||:.::.|.::.||||
  Fly    77 TLVIKDSRFSLRY----DPNSSTYKLQIKDIQETDAGTYTCQVVISTVHKVSAEVKLSVRRPPVI 137

  Fly   150 AENTPKSTLVTEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSVHRMDRGGY 214
            ::|:.:|.:.:||..:::.|:|:|:|.|||:|.||:||::|.........||||:||.:.|||.|
  Fly   138 SDNSTQSVVASEGSEVQMECYASGYPTPTITWRRENNAILPTDSATYVGNTLRIKSVKKEDRGTY 202

  Fly   215 YCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELECSVQGYPAPTVVWHKNGVPLQ 279
            ||:|.||..:.|:|.|.|||||.|.|.|.||::.|.:.:..:|||.::.||.|.:||.|:.:.|.
  Fly   203 YCVADNGVSKGDRRNINVEVEFAPVITVPRPRLGQALQYDMDLECHIEAYPPPAIVWTKDDIQLA 267

  Fly   280 SSRHHEVANTASSSGTTTSVLRIDSVGEEDFGDYYCNATNKLGHADARLHLFQTVIPV 337
            :::|:.:::.|::...|.|.||:.:|.:..:|||.|.|||:.|.|:||::||:|:|||
  Fly   268 NNQHYSISHFATADEYTDSTLRVITVEKRQYGDYVCKATNRFGEAEARVNLFETIIPV 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:400151 33/109 (30%)
Ig strand B 50..54 CDD:409353 3/3 (100%)
Ig strand C 63..68 CDD:409353 1/4 (25%)
Ig strand E 101..112 CDD:409353 2/10 (20%)
Ig strand F 122..127 CDD:409353 2/4 (50%)
Ig strand G 136..139 CDD:409353 0/2 (0%)
Ig_3 146..220 CDD:464046 34/73 (47%)
I-set 254..330 CDD:400151 28/75 (37%)
Ig strand B 255..259 CDD:409353 1/3 (33%)
Ig strand C 268..272 CDD:409353 1/3 (33%)
Ig strand E 298..302 CDD:409353 2/3 (67%)
Ig strand F 312..317 CDD:409353 3/4 (75%)
LacNP_523713.2 IG_like 36..131 CDD:214653 29/102 (28%)
Ig strand B 46..50 CDD:409381 3/3 (100%)
Ig strand C 60..63 CDD:409381 1/2 (50%)
Ig strand E 96..100 CDD:409381 1/3 (33%)
Ig strand F 110..115 CDD:409381 2/4 (50%)
Ig strand G 124..127 CDD:409381 0/2 (0%)
Ig_3 134..208 CDD:464046 34/73 (47%)
Ig 227..318 CDD:472250 33/90 (37%)
Ig strand C 256..260 CDD:409353 1/3 (33%)
Ig strand E 286..290 CDD:409353 2/3 (67%)
Ig strand F 300..305 CDD:409353 3/4 (75%)

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