DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and dpr3

DIOPT Version :9

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001014459.2 Gene:dpr3 / 3346208 FlyBaseID:FBgn0053516 Length:522 Species:Drosophila melanogaster


Alignment Length:330 Identity:65/330 - (19%)
Similarity:109/330 - (33%) Gaps:96/330 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DSVLSAPVIS-QISKDVVASVGDS-VEFNCTVEEVGQLSVSWAKRPSESDTNSVVLSMRNILSLP 89
            |:..|.|:.. .:.:::....|.: ....|.|:.:...||||.::   .|.:  :|::.......
  Fly   230 DTSQSLPIFDFGMPRNITGRTGHTEAIIKCRVDSLHDKSVSWIRK---RDLH--ILTVGTATYTS 289

  Fly    90 DQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKLSLQIKTPPVIAENTP 154
            |:|:.||.::    .|..:|..::.....|.|.|||||      ....|:|:..:..  |.|.:|
  Fly   290 DKRFQVTESK----DSREWTLHVKAPLAKDSGIYECQV------NTEPKMSMAFQLN--IIEISP 342

  Fly   155 KSTLVTE---------GQNLELTCHANGFPKPTIS------WAREHNAVMPAGGHLLAEPTLRIR 204
            .:..|..         |..:.|.|...   :|::.      |.|..:.:.|...           
  Fly   343 DAKAVISGPPDLHFKAGSAIILNCLVQ---QPSVKDIGPIYWYRGEHMITPFDA----------- 393

  Fly   205 SVHRMDRGGYYCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELECSVQGYP---A 266
                            .:|||:....|.|                   |.       ||.|   :
  Fly   394 ----------------DDGQPEIPAGRGE-------------------HP-------QGIPEDTS 416

  Fly   267 PTVVWHKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEEDFGDYYCNATNKLGHADARLHLF 331
            |..:..:  |.||......:|..:....|..|.|||.:....|.|:|.|..|. ...|...:|:.
  Fly   417 PNDIMSE--VDLQMEFATRIAMESQLGDTLKSRLRISNAQTTDTGNYTCQPTT-ASSASVLVHVI 478

  Fly   332 QTVIP 336
            ....|
  Fly   479 NDENP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:254352 25/111 (23%)
Ig 37..127 CDD:299845 20/90 (22%)
IG_like 154..234 CDD:214653 13/94 (14%)
IGc2 161..223 CDD:197706 7/76 (9%)
I-set 254..330 CDD:254352 19/78 (24%)
IGc2 254..322 CDD:197706 18/70 (26%)
dpr3NP_001014459.2 Ig 243..330 CDD:299845 23/101 (23%)
IG_like 243..329 CDD:214653 22/100 (22%)
Ig 350..464 CDD:299845 29/171 (17%)
IG_like <441..477 CDD:214653 11/36 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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