DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and Sdk1

DIOPT Version :9

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_808547.3 Gene:Sdk1 / 330222 MGIID:2444413 Length:2193 Species:Mus musculus


Alignment Length:314 Identity:79/314 - (25%)
Similarity:119/314 - (37%) Gaps:74/314 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AP--VISQISKDVVASVGD-SVEFNCTVEEVGQLSVSWAKRPSESDTNSVVLSMRNILSLPDQRY 93
            ||  |::..::.|||...: ::|.......|.:|||.|                        :|.
Mouse   274 APIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHW------------------------KRN 314

  Fly    94 NVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLV--SATEKVTKKLSLQIKTPPVIAENTPKS 156
            .|.:|.|..:.....|  |.|...:|.|.|.|:..:  |..|....:..|.|..||..... |:|
Mouse   315 GVRLTSGLHSYGRRLT--ITNPTSADTGMYVCEATLRGSTFEPARARAFLSIIEPPYFTAE-PES 376

  Fly   157 TLVTE-GQNLELTCHANGFPKPTISWARE----------HNAVMPAGGHLLAEPTLRIRSVHRMD 210
            .::.| .:.:::.|.|.|.|.||:.|.::          ...|:|:||       |.|:.:...|
Mouse   377 RILGEVEETMDIPCRAMGVPLPTLQWYKDAVPLSKLQNPRYKVLPSGG-------LHIQKLSPED 434

  Fly   211 RGGYYCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMV-SHSAELECSVQGYPAPTVVWHKN 274
            .|.:.|.|.|..|:.............|.. .|||....:. ..:|.|.|.|.|.|.|.:.| |.
Mouse   435 SGIFQCFASNEGGEVQTHTYLDVTNIAPAF-TQRPVDTTVTDGMTAVLRCEVSGAPKPAITW-KR 497

  Fly   275 GVPLQSSRHHEVANTA---------SSSGTTTSVLRIDSVGEEDFGDYYCNATN 319
            |       :|.:|:.:         .|.|     |||..|..:|.|:|.|.|.|
Mouse   498 G-------NHILASGSVRIPRFMLLESGG-----LRIAPVFIQDAGNYTCYAAN 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:254352 25/114 (22%)
Ig 37..127 CDD:299845 20/90 (22%)
IG_like 154..234 CDD:214653 22/90 (24%)
IGc2 161..223 CDD:197706 19/72 (26%)
I-set 254..330 CDD:254352 24/75 (32%)
IGc2 254..322 CDD:197706 24/75 (32%)
Sdk1NP_808547.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56
Ig_2 94..169 CDD:290606
IG_like 100..169 CDD:214653
IG_like 183..263 CDD:214653
Ig 197..247 CDD:299845
IG_like 281..357 CDD:214653 22/101 (22%)
IGc2 294..347 CDD:197706 17/78 (22%)
I-set 368..457 CDD:254352 23/96 (24%)
Ig 388..454 CDD:143165 19/72 (26%)
I-set 462..552 CDD:254352 28/92 (30%)
Ig 476..552 CDD:299845 24/77 (31%)
I-set 557..646 CDD:254352
Ig 562..646 CDD:299845
FN3 650..741 CDD:238020
fn3 753..839 CDD:278470
FN3 854..949 CDD:238020
FN3 954..1036 CDD:238020
FN3 1052..1148 CDD:238020
FN3 1158..1253 CDD:238020
FN3 1261..1349 CDD:238020
FN3 1360..1453 CDD:238020
FN3 1459..1554 CDD:238020
FN3 1562..1676 CDD:238020
FN3 1686..1779 CDD:238020
FN3 1784..1865 CDD:238020
FN3 1885..1978 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2057..2080
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q6V4S5 2187..2193
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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