Protein Alignment Ama and Negr1

DIOPT Version :10

• Sequence 1: NP_731114.2
• Gene: Ama / 40831
• FlyBaseID: FBgn0000071
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: XP_036019026.1
• Gene: Negr1 / 320840
• MGIID: 2444846
• Length: 362
• Species: Mus musculus
• Alignment Length: 329
• Identity: 96/329 - (29%)
• Similarity: 151/329 - (45%)
• Gaps: 34/329 - (10%)

  Fly    14 LLIGLIFCLAI--SLDSVLSAPVISQISKDVVASVGDSVEFNCTVEEVGQLSVSWAKRPSESDTN 76
            :|:.|..||..  |:|...:|      ..:::...||:....|.:|: |....:|..|      :
Mouse    18 VLLSLCSCLPAGQSVDFPWAA------VDNMLVRKGDTAVLRCYLED-GASKGAWLNR------S 69

  Fly    77 SVVLSMRNILSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKLSL 141
            |::.:..:..|: |.|.:::.     .....|:.:|||::|:|.|||.|.|....|.: |.::.|
Mouse    70 SIIFAGGDKWSV-DPRVSIST-----LNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPR-TMQVHL 127

  Fly   142 QIKTPPVIAENTPKSTLVTEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSV 206
            .::.||.|.:.:...| :.||.|:.|||.|.|.|:|.|||..    :.|:.........|.|..:
Mouse   128 TVQVPPKIYDISNDMT-INEGTNVTLTCLATGKPEPVISWRH----ISPSAKPFENGQYLDIYGI 187

  Fly   207 HRMDRGGYYCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMV-SHSAELECSVQGYPAPTVV 270
            .|...|.|.|.|:|....||.:.:||.|.|.|  .:|..|...:. ..|..:.|...|.|.|...
Mouse   188 TRDQAGEYECSAENDVSFPDVKKVRVIVNFAP--TIQEIKSGTVTPGRSGLIRCEGAGVPPPAFE 250

  Fly   271 WHKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEEDFGDYYCNATNKLGHADARLHLFQTVI 335
            |:|....|.:.:...:....|    |.|:|.:.:|.:|.||:|.|.|.||||..:|.|.|.|.:.
Mouse   251 WYKGEKRLFNGQQGIIIQNFS----TRSILTVTNVTQEHFGNYTCVAANKLGTTNASLPLNQIIE 311

  Fly   336 PVPS 339
            |..|
Mouse   312 PTTS 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ama	NP_731114.2	I-set	33..143	CDD:400151	25/109 (23%)
		Ig strand B	50..54	CDD:409353	0/3 (0%)
		Ig strand C	63..68	CDD:409353	1/4 (25%)
		Ig strand E	101..112	CDD:409353	1/10 (10%)
		Ig strand F	122..127	CDD:409353	3/4 (75%)
		Ig strand G	136..139	CDD:409353	1/2 (50%)
		Ig_3	146..220	CDD:464046	25/73 (34%)
		I-set	254..330	CDD:400151	25/75 (33%)
		Ig strand B	255..259	CDD:409353	0/3 (0%)
		Ig strand C	268..272	CDD:409353	0/3 (0%)
		Ig strand E	298..302	CDD:409353	2/3 (67%)
		Ig strand F	312..317	CDD:409353	2/4 (50%)
Negr1	XP_036019026.1	IG_like	41..129	CDD:214653	25/101 (25%)
		Ig strand B	50..54	CDD:409353	0/3 (0%)
		Ig strand C	62..66	CDD:409353	0/3 (0%)
		Ig strand E	95..99	CDD:409353	1/3 (33%)
		Ig strand F	109..114	CDD:409353	3/4 (75%)
		Ig strand G	122..125	CDD:409353	1/2 (50%)
		Ig_3	132..201	CDD:464046	25/73 (34%)
		IG_like	225..306	CDD:214653	26/84 (31%)
		Ig strand B	235..239	CDD:409353	0/3 (0%)
		Ig strand C	248..252	CDD:409353	0/3 (0%)
		Ig strand E	274..278	CDD:409353	2/3 (67%)
		Ig strand F	288..293	CDD:409353	2/4 (50%)