DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and dpr1

DIOPT Version :9

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001286645.1 Gene:dpr1 / 2768858 FlyBaseID:FBgn0040726 Length:367 Species:Drosophila melanogaster


Alignment Length:261 Identity:61/261 - (23%)
Similarity:99/261 - (37%) Gaps:61/261 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQYNKRPDMARLRLLIGLIFCLAISL-----------DSVLSAPVIS----------QISKDVVA 44
            |....|.::..|..|||.:..|::.|           ....|...||          .:.:::..
  Fly     1 MSLPSRANIGLLNWLIGWLLLLSMVLLRGYNAALAPTPPTTSTTTISPSNLLPYFDFDVPRNLTV 65

  Fly    45 SVGDSVEFNCTVEEVGQLSVSWAKRPSESDTNSVVLSMRNILSLPDQRYNVTVTEGPKTGSAIYT 109
            :||.:...:|.||.:|...|||.::   .|.:  :|:........|||:.|...:    |||.:|
  Fly    66 TVGQTGFLHCRVERLGDKDVSWIRK---RDLH--ILTAGGTTYTSDQRFQVLRPD----GSANWT 121

  Fly   110 FRIQNIEVSDMGPYECQVLVSATEKVTKKLSLQIKTPPVIAE-NTPKSTLVTEGQNLELTC---- 169
            .:|:..:..|.|.||||  ::...|::  ||.......:.|| ..|...:|..|.::.|||    
  Fly   122 LQIKYPQPRDSGVYECQ--INTEPKMS--LSYTFNVVELKAEIFGPSDLMVKTGSDINLTCKIMQ 182

  Fly   170 --HANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIR-------------SVHRM---DRGGYYC 216
              |..|    .|.|.:....:...|.:.:.....|||             .:.|.   |.|.|.|
  Fly   183 GPHELG----NIFWYKGSEMLDGKGENEIDSSMARIRVEDDWTDGLTSRLKIKRAMPGDTGNYTC 243

  Fly   217 I 217
            :
  Fly   244 V 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:254352 31/119 (26%)
Ig 37..127 CDD:299845 25/89 (28%)
IG_like 154..234 CDD:214653 19/86 (22%)
IGc2 161..223 CDD:197706 17/79 (22%)
I-set 254..330 CDD:254352
IGc2 254..322 CDD:197706
dpr1NP_001286645.1 Ig 59..154 CDD:299845 29/107 (27%)
IG_like 60..150 CDD:214653 29/102 (28%)
IG_like 163..257 CDD:214653 19/86 (22%)
Ig 174..244 CDD:143165 15/73 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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