DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and DIP-lambda

DIOPT Version :9

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster


Alignment Length:373 Identity:92/373 - (24%)
Similarity:162/373 - (43%) Gaps:62/373 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ARLRLLIGLIFC----LAISLDSVLSAPVISQI-----SKDV-----------VASVGDSVEFNC 54
            ||:::..|.:.|    :.|...::.....::.|     |:::           ...:|..:.|.|
  Fly     7 ARIKMYNGTLACSIAFILIKAITITKCHAVAHIHGKGESEEIDPQFLAKLSNTTVPIGRDISFTC 71

  Fly    55 TVEEVGQLSVSWAKRPSESDTNSVVLSMRNILSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSD 119
            .|:.:|...|:|.|    ||:.:::....:::|| :.|.:||     ..|...:...|..::::|
  Fly    72 VVDNLGHYRVAWIK----SDSKAILGIHTHMVSL-NPRLSVT-----HNGHNTWKLHISRVQIND 126

  Fly   120 MGPYECQVLVSATEKVTKKLS--LQIKTPPVI---AENTPKSTLVTEGQNLELTCHANGFPKPTI 179
            .|.|.|||   .|:.: |.||  |.:..||.|   .|:.|:..:..||.::.|.|...|.|:|.:
  Fly   127 SGSYMCQV---NTDPM-KSLSGYLDVVVPPDILNHPEHNPEDGVCQEGGSISLMCSVTGVPRPKV 187

  Fly   180 SWAREHNAVMPAGGHLLAE--------------PTLRIRSVHRMDRGGYYCIAQNGEGQPDKRLI 230
            .|.||      ||..::..              ..|.:.:|.|.|.|||.|||.||......:..
  Fly   188 LWRRE------AGKEIILRTDGRDKTGFKSVEGERLVLTNVQRSDMGGYNCIASNGIPPSVSKRF 246

  Fly   231 RVEVEFRPQIAVQRPKIAQMVSHSAELECSVQGYPAPTVVWHKN--GVPLQSSRHHEVANTASSS 293
            .|.|.|.|.:......:...|.....|||.|:.:|.|...|:::  .:.|.:...:.::....:.
  Fly   247 NVYVNFSPTVKAISQLVGAPVEREVTLECIVEVFPKPLNGWYRSEGNIKLHNGNKYNISEEVINI 311

  Fly   294 GTTTSVLRIDSVGEEDFGDYYCNATNKLGHADARLHLFQTVIPVPSLS 341
            .|....|.|..:.:.|||.|.|::.|.||.:::.:.|.:..:| |.|:
  Fly   312 YTWHLNLTIRHLTKSDFGTYSCSSVNALGKSESLIRLQELRLP-PKLT 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:254352 30/127 (24%)
Ig 37..127 CDD:299845 23/105 (22%)
IG_like 154..234 CDD:214653 26/93 (28%)
IGc2 161..223 CDD:197706 24/75 (32%)
I-set 254..330 CDD:254352 19/77 (25%)
IGc2 254..322 CDD:197706 17/69 (25%)
DIP-lambdaNP_001334747.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
43.920

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