DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and Igsf9b

DIOPT Version :9

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_011240777.1 Gene:Igsf9b / 235086 MGIID:2685354 Length:1443 Species:Mus musculus


Alignment Length:336 Identity:81/336 - (24%)
Similarity:126/336 - (37%) Gaps:114/336 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 TFRIQNIEVSDMGPYECQVLVSATEKVT----KKLSLQIKTPPVIAENTPKSTLVTEGQNLELTC 169
            :.|::.:...|.|.|||:||:...:..|    ..:.|.|..||...|..|:.....||.::.:||
Mouse    99 SLRLEQVRSEDQGWYECKV
LMLDQQYDTFHNGSWVHLTINAPPTFTETPPQYIEAKEGGSITMTC 163

  Fly   170 HANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSVHRMDRGGYYCIAQNGEG----------- 223
            .|.|.|||.::|.:|...:..:..:.:::.:|.:.||.|.|||.|.|.|.:.:|           
Mouse   164 TAFGNPKPIVTWLKEGTLLGASAKYQVSDGSLTVTSVSREDRGAYTCRAYSIQGEAVHTTHLLVQ 228

  Fly   224 ----------------------------------------------QPDKRL-IRVEVE-----F 236
                                                          |.|.:| :|:.::     |
Mouse   229 GPPFIVSPPENITVNISQDALLTCRAEAYPGNLTYTWYWQDENVYFQNDLKLRVRILIDGTLIIF 293

  Fly   237 R--PQ----------------------IAVQRP-KIAQM-------VSHSAELECSVQGYPAPTV 269
            |  |:                      :.||.| ::..|       |.....:.|.|...|..||
Mouse   294 RVKPEDAGKYTCVPSNSLGRSPSASAYLTVQYPARVLNMPPVIYVPVGIHGYIRCPVDAEPPATV 358

  Fly   270 V-WHKNGVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEEDFGDYYCNATNKLG----HADARLH 329
            | |:|:|.|||..::  :..|....|:    :||:...||..|.|.|...|.||    .|.|||.
Mouse   359 VKWNKDGRPLQVEKN--LGWTLMEDGS----IRIEEATEEALGTYTCVPYNTLGTMGQSAPARLV 417

  Fly   330 L----FQTVIP 336
            |    :.||:|
Mouse   418 LKDPPYFTVLP 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:254352 10/37 (27%)
Ig 37..127 CDD:299845 6/17 (35%)
IG_like 154..234 CDD:214653 27/137 (20%)
IGc2 161..223 CDD:197706 21/61 (34%)
I-set 254..330 CDD:254352 28/80 (35%)
IGc2 254..322 CDD:197706 22/68 (32%)
Igsf9bXP_011240777.1 Ig 43..117 CDD:319273 6/17 (35%)
I-set 141..227 CDD:369462 25/85 (29%)
Ig 231..323 CDD:386229 7/91 (8%)
Ig <355..416 CDD:386229 23/66 (35%)
Ig 440..504 CDD:319273
FN3 512..607 CDD:238020
FN3 623..705 CDD:238020
PHA03247 <900..1248 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I11062
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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