DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and LOC1280937

DIOPT Version :10

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_061518554.1 Gene:LOC1280937 / 1280937 VectorBaseID:AGAMI1_000362 Length:537 Species:Anopheles gambiae


Alignment Length:348 Identity:86/348 - (24%)
Similarity:129/348 - (37%) Gaps:102/348 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ISKDVV--ASVGDSVEFNCTVEEVGQLSVSWAKRPSESDTNSVVLSMRN--------ILSLPDQR 92
            ::||.:  |...:.|...|.|              |...||::::...|        |..:||.|
Mosquito    81 LTKDYIEQARESEQVTLKCDV--------------SNPTTNNIIIWYYNNKPIFQQLIRLIPDTR 131

  Fly    93 YNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKLSLQIKTPP-----VIAEN 152
            |.    .||.     ::..|.|::::|.|.|.||:|   ...:|.|:.||:.|||     :....
Mosquito   132 YE----RGPD-----FSLVIDNVQLTDEGVYSCQLL---PNNMTVKIELQLLTPPRDVHIMHGSK 184

  Fly   153 TPKSTLV--TEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHL-----------LAEPTLRIR 204
            |...|:.  ...:.:.|.|.|.|.|.|.|:||..       |.||           |.:..|.|.
Mosquito   185 TINDTIEMHQRDRKVVLLCSAGGHPTPLITWAYR-------GRHLDEENSRQLGIKLRKEFLEIH 242

  Fly   205 SVHRMDRGGYYCIAQNGEGQPDKRLIRV----------EVEFRPQIAVQRPKIAQ---------- 249
            .|.....|.|.|:||||.|.|..:.:.|          |.::.....|..|.:.:          
Mosquito   243 EVKSQHAGDYECMAQNGIGNPISQTVTVVVKDDSSEELEDDYMDDANVTAPPLEKGSPIIHKHSS 307

  Fly   250 ----MVSHSAELECSVQGYPAP-TVVWHKN-----GVPLQ---SSRHHEVANTASSSGTTTSVLR 301
                .:..:.|:.|.....|.| .:.|.:|     .||.|   ::.||...|...        |.
Mosquito   308 YINTAIGENVEMVCLYDSNPEPRKIQWIRNDEIVQSVPAQTIITNDHHNHHNRTR--------LT 364

  Fly   302 IDSVGEEDFGDYYCNATNKLGHA 324
            |.:|.::|...|||...|:||.|
Mosquito   365 IKNVQQKDLQAYYCKIENELGEA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:400151 28/114 (25%)
Ig strand B 50..54 CDD:409353 1/3 (33%)
Ig strand C 63..68 CDD:409353 0/4 (0%)
Ig strand E 101..112 CDD:409353 1/10 (10%)
Ig strand F 122..127 CDD:409353 2/4 (50%)
Ig strand G 136..139 CDD:409353 1/2 (50%)
Ig_3 146..220 CDD:464046 24/91 (26%)
I-set 254..330 CDD:400151 23/80 (29%)
Ig strand B 255..259 CDD:409353 1/3 (33%)
Ig strand C 268..272 CDD:409353 0/3 (0%)
Ig strand E 298..302 CDD:409353 1/3 (33%)
Ig strand F 312..317 CDD:409353 3/4 (75%)
LOC1280937XP_061518554.1 None

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