DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and LOC1279385

DIOPT Version :10

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_061513627.1 Gene:LOC1279385 / 1279385 VectorBaseID:AGAMI1_005914 Length:452 Species:Anopheles gambiae


Alignment Length:329 Identity:87/329 - (26%)
Similarity:146/329 - (44%) Gaps:38/329 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VLSAPVISQISKDVVASVGDSVEFNCTVEEVGQLSVSWAKRPSESDTNSVVLSMRNILSLPDQRY 93
            |:..|..:.:.::|....|.:|:..|:|:.:|...|:|.     ....|.:|::.|.:...:.|.
Mosquito    37 VVEEPEFTDVIENVTVPAGRNVKLACSVKNLGSYKVAWM-----HFEQSAILTVHNHVITRNPRI 96

  Fly    94 NVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKLS---LQIKTPPVIAENTPK 155
            :||..:..|  ...:...|.|::..|.|.|.||:     ..||.|..   |.:..||.|.::...
Mosquito    97 SVTHDKHDK--HKTWFLHISNVQEEDKGRYMCQI-----NTVTAKTQFGYLHVVVPPNIDDSLSS 154

  Fly   156 S-TLVTEGQNLELTCHANGFPKPTISWAREHNA---------VMPAGGHLLAEPTLRIRSVHRMD 210
            | .:|.||.|:.|.|.|.|.|.||:.|.|:.|:         |:...|:     ::.|..:.|:|
Mosquito   155 SDVIVREGSNVTLKCRATGSPTPTVKWKRDDNSKIAINRSLNVLEWEGN-----SIEITKISRLD 214

  Fly   211 RGGYYCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELECSVQGYPAPTVVW-HKN 274
            .|.|.|||.||......:.|:|.|:|.|.:.:....:...:..:..|||..:.:|.....| .::
Mosquito   215 MGAYLCIASNGVPPTVSKRIKVSVDFPPMLWIPHQLVGVPLYFNVTLECFTEAHPTSLNYWTRED 279

  Fly   275 GVPLQSSRHHEVANTASSSG----TTTSVLRIDSVGEEDFGDYYCNATNKLGHADARLHLFQTVI 335
            |..:..|:.:   .|.|:.|    .|...|.|.::.:.|:|.|.|.|.|..|..|..:.|:.:..
Mosquito   280 GHMIHDSKKY---RTESNVGMPIYKTHMRLHIYNIQQTDYGTYKCVAKNPRGETDGTIRLYTSTP 341

  Fly   336 PVPS 339
            |..|
Mosquito   342 PTTS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:400151 27/112 (24%)
Ig strand B 50..54 CDD:409353 1/3 (33%)
Ig strand C 63..68 CDD:409353 2/4 (50%)
Ig strand E 101..112 CDD:409353 1/10 (10%)
Ig strand F 122..127 CDD:409353 2/4 (50%)
Ig strand G 136..139 CDD:409353 1/2 (50%)
Ig_3 146..220 CDD:464046 28/83 (34%)
I-set 254..330 CDD:400151 21/80 (26%)
Ig strand B 255..259 CDD:409353 1/3 (33%)
Ig strand C 268..272 CDD:409353 1/4 (25%)
Ig strand E 298..302 CDD:409353 1/3 (33%)
Ig strand F 312..317 CDD:409353 2/4 (50%)
LOC1279385XP_061513627.1 None

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