DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and iglon5

DIOPT Version :9

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:XP_002938252.1 Gene:iglon5 / 100488314 XenbaseID:XB-GENE-945713 Length:333 Species:Xenopus tropicalis


Alignment Length:332 Identity:81/332 - (24%)
Similarity:142/332 - (42%) Gaps:51/332 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ISLDSVLSAPVISQI-----------SKDVVASVGDSVEFNCTVEEVGQLSVSWAKRPSESDTNS 77
            :||.| |...:::|:           :.:...|.||:...:|.::: ....|:|..|      ::
 Frog     8 VSLAS-LGIVMLAQVLFVQCTEFVPPADNYTVSQGDNATLSCLIDD-KVTRVAWLNR------SN 64

  Fly    78 VVLSMRNILSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKLSLQ 142
            ::.:.::..|:..:...:|.|:..      |:..|.:::|:|.|.|.|. ..:..:..|.::.|.
 Frog    65 ILYAGKDKWSIDSRVQLLTNTKSE------YSIVITHVDVADEGLYTCS-FQTEDKPHTSQVYLI 122

  Fly   143 IKTPPVIAENTPKSTLVTEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSVH 207
            ::.|..|. |...|..|.||.|:.|.|.|.|.|:|||:|.:........|      ..|.|..::
 Frog   123 VQVPAKIV-NISSSVTVNEGSNVNLQCLAVGKPEPTITWQQLSEGFSSEG------ELLEITEIN 180

  Fly   208 RMDRGGYYCIAQNGEGQPDKRLIRVEVEFRPQIA----VQRPKIAQMVSHSAELECSVQGYPAPT 268
            |...|.|.|:..||...||.:.:::.|.:.|.|.    .|.|     |...|.|.|.....|...
 Frog   181 RQQAGDYECVTSNGVSVPDTKKVQITVNYPPYITDVKNAQSP-----VGRPATLRCKAMAVPPAE 240

  Fly   269 VVWHKNGVPLQSSRHHEVANTASSSGTTT---SVLRIDSVGEEDFGDYYCNATNKLGHADARLHL 330
            ..|:|:      .:...::.|...|..|.   ||:...:|....:|:|.|.|:||||..::.|.|
 Frog   241 FEWYKD------EKRRLISGTEGLSIKTESSWSVIVFSNVTSRHYGNYTCLASNKLGSFNSSLRL 299

  Fly   331 FQTVIPV 337
            .:...|:
 Frog   300 LKPGDPL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:254352 20/120 (17%)
Ig 37..127 CDD:299845 18/100 (18%)
IG_like 154..234 CDD:214653 25/79 (32%)
IGc2 161..223 CDD:197706 21/61 (34%)
I-set 254..330 CDD:254352 21/78 (27%)
IGc2 254..322 CDD:197706 18/70 (26%)
iglon5XP_002938252.1 Ig 31..123 CDD:299845 19/105 (18%)
IG_like 35..123 CDD:214653 19/101 (19%)
Ig 126..207 CDD:299845 28/87 (32%)
I-set 128..207 CDD:254352 27/85 (32%)
I-set 210..299 CDD:254352 26/99 (26%)
Ig 227..298 CDD:143165 20/76 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR42757
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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