DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ama and igsf9

DIOPT Version :9

Sequence 1:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_001090640.1 Gene:igsf9 / 100036605 XenbaseID:XB-GENE-989817 Length:1423 Species:Xenopus tropicalis


Alignment Length:363 Identity:93/363 - (25%)
Similarity:137/363 - (37%) Gaps:75/363 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FCLAISLDSVLSAPVISQISKD---VVASVGDSVEFNCTV--EEVGQ---LSVSWAKRPSESDTN 76
            :||.|::..:.|..:...|..|   ||..||:|....|::  ::.|:   ..:.|          
 Frog     3 WCLCINVLILFSCCINGAIRSDSQTVVGRVGESTVLGCSLLHQDAGRPPLYVIEW---------- 57

  Fly    77 SVVLSMRNILSLP------------DQRY--NVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQV 127
                 :|....||            |.:|  ...:.||.       :..|:::...|.|.|||:|
 Frog    58 -----VRFGFMLPIFIKFGLYSPRVDPQYLGRTRIEEGA-------SLHIESLRSEDQGWYECRV 110

  Fly   128 LVSATEKVTKK------LSLQIKTPPVIAENTPKSTLVTEGQNLELTCHANGFPKPTISWAREHN 186
            |........:.      :.|.:.:||...|..|....|..|..|.|||.|.|.|:|.::|.|: .
 Frog   111 LFLDRHHGEEDFQNGTWVHLTVNSPPSFRETPPTYVEVRVGDTLTLTCVAYGNPQPVVTWKRD-G 174

  Fly   187 AVMPAGGHLLA-EPTLRIRSVHRMDRGGYYCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQM 250
            ..:.:|..:.| ..:|.|..|.|.:.|.|.|.|.:.||:. ....||.|:..|.|.|........
 Frog   175 VTLESGDKVQASNGSLSIVGVERGNAGVYTCHAFSDEGEV-THTSRVLVQGPPIIVVPPENTTVN 238

  Fly   251 VSHSAELECSVQGYPAP-TVVWHK--NGVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEEDFGD 312
            ||..|.|.|..:.|||. |..|.:  |.|.|.:.....|......|      ..|..|..||.|.
 Frog   239 VSQDAFLTCQAEAYPANLTYTWFQGSNNVFLLNRLQPRVRILVDGS------FLIQRVTPEDAGK 297

  Fly   313 YYCNATN---KLGHADARLHLF----------QTVIPV 337
            |.|..:|   |...|.|.|.:.          :|.:|:
 Frog   298 YTCIPSNGMWKSPSASAYLTVLHPAYVTSMPAETYLPI 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmaNP_731114.2 I-set 33..143 CDD:254352 26/137 (19%)
Ig 37..127 CDD:299845 23/111 (21%)
IG_like 154..234 CDD:214653 27/80 (34%)
IGc2 161..223 CDD:197706 21/62 (34%)
I-set 254..330 CDD:254352 25/81 (31%)
IGc2 254..322 CDD:197706 22/73 (30%)
igsf9NP_001090640.1 Ig 25..132 CDD:299845 24/128 (19%)
IG_like 25..110 CDD:214653 21/106 (20%)
I-set 136..222 CDD:254352 29/87 (33%)
IGc2 151..212 CDD:197706 21/61 (34%)
Ig_2 226..318 CDD:290606 30/97 (31%)
I-set 226..318 CDD:254352 30/97 (31%)
IG_like 328..407 CDD:214653 2/8 (25%)
Ig 340..402 CDD:299845
IG_like 431..502 CDD:214653
Ig 439..502 CDD:299845
FN3 507..601 CDD:238020
FN3 624..714 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 62 1.000 Domainoid score I10140
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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