Protein Alignment bcd and HB40

DIOPT Version :10

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001329011.1
• Gene: HB40 / 829827
• AraportID: AT4G36740
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 163
• Identity: 38/163 - (23%)
• Similarity: 59/163 - (36%)
• Gaps: 48/163 - (29%)

  Fly    80 PDVFPSEELPDSLVMRRPRRTRTT------------------FTSSQIAELEQHFLQGRYLTAPR 126
            |||:.....|...|.:..||.:.|                  .|..|:..||..|.....|.:.|
plant    18 PDVYTQIVQPVGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESER 82

  Fly   127 LADLSAKLALGTAQVKIWFKNRRRRHK------------------------IQSD--QHKDQSYE 165
            ...|:|:|.|...||.:||:|||.|.|                        ::|:  |.|:|.|:
plant    83 KDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYD 147

  Fly   166 G----MPLSPGMKQSDGDPPSLQTLSLGGGATP 194
            .    ..|:..::....:.|...::|:....||
plant   148 AEREIQRLAERVEGGSSNSPISSSVSVEANETP 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	18/46 (39%)
HB40	NP_001329011.1	HOX	56..109	CDD:197696	19/52 (37%)